RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 GRID2O43424 1007 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ZNF780AO75290 641 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 F9P00740 461 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 COX7A2P14406 83 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 YBX3P16989 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
CD28-202ENST00000374481 HTR1EP28566 365 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ATP4BP51164 291 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 KYAT1Q16773 422 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CRTC1Q6UUV9 634 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 SYT12Q8IV01 421 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 SAMD14Q8IZD0 417 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 OR5J2Q8NH18 312 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 GTPBP3Q969Y2 492 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 NXPE2Q96DL1 559 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 RSPH9Q9H1X1 276 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 WASH6PQ9NQA3 447 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 EIF2B3Q9NR50 452 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 ARHGAP28Q9P2N2 729 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 PPP2R3BQ9Y5P8 575 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 MYH3P11055 1940 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 GSAPA4D1B5 854 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 WRBO00258 174 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CDK2AP1O14519 115 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TRIM3O75382 744 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 CDK1P06493 297 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 NUDT7P0C024 238 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CYP2A6P11509 494 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 ZNF14P17017 642 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 TNFSF8P32971 234 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 GPLD1P80108 840 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 IDNKQ5T6J7 187 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ZNF782Q6ZMW2 699 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 ZNF567Q8N184 647 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ZNF655Q8N720 491 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 OR2T35Q8NGX2 323 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 LILRB1Q8NHL6 650 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 CEP76Q8TAP6 659 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 MTFMTQ96DP5 389 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 SLC30A3Q99726 388 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 MOCS1Q9NZB8 636 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 OAS3Q9Y6K5 1087 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 TOPAZ1Q8N9V7 1692 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TRAV19A0A0A6YYK7 116 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 MFSD11O43934 449 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 DIRAS1O95057 198 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CPNE6O95741 557 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TRAPPC2P0DI81 140 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TRAPPC2BP0DI82 140 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CXCL8P10145 99 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 BMP1P13497 986 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 HOXA10P31260 410 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 CSTF2P33240 577 aaKnown RBP eCLIP10.05□□□□□ -0.8
CD28-202ENST00000374481 IL2P60568 153 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 DEFA6Q01524 100 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 FAM174BQ3ZCQ3 159 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 SH3PXD2AQ5TCZ1 1133 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ZFAND1Q8TCF1 268 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 BSNDQ8WZ55 320 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TCEAL4Q96EI5 215 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ADGRE3Q9BY15 652 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ABCG5Q9H222 651 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 DBNDD1Q9H9R9 158 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 AGO4Q9HCK5 861 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 C1orf109Q9NX04 203 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 LRRC14BA6NHZ5 514 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 C2orf81A6NN90 581 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 TLL1O43897 1013 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 PPM1BO75688 479 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 CCNB2O95067 398 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 NTSR2O95665 410 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 C4BPAP04003 597 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 ACSL1P33121 698 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 CDH12P55289 794 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 NFIAQ12857 509 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 SSX2Q16385 188 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 OCLNQ16625 522 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 DALRD3Q5D0E6 543 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 KANK2Q63ZY3 851 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 INTS5Q6P9B9 1019 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 BEND5Q7L4P6 421 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 NKAPQ8N5F7 415 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 BCL7CQ8WUZ0 217 aaPredicted RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 NELL1Q92832 810 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 HTATIP2Q9BUP3 242 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 TRIM62Q9BVG3 475 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 ABCG8Q9H221 673 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 DUS2Q9NX74 493 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 OPTCQ9UBM4 332 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 TNFRSF10DQ9UBN6 386 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 CNTNAP4Q9C0A0 1308 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 LYRM1O43325 122 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 CCNDBP1O95273 360 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 FHP07954 510 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 STSP08842 583 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 UROSP10746 265 aa10.04□□□□□ -0.8
CD28-202ENST00000374481 OGNP20774 298 aaKnown RBP10.04□□□□□ -0.8
CD28-202ENST00000374481 SSTR2P30874 369 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms