RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TBC1D21Q8IYX1 336 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 DNAJC22Q8N4W6 341 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 PTERQ96BW5 349 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 CDKN2AIPNLQ96HQ2 116 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 C5orf34Q96MH7 638 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 PPP1R2P1Q96PQ5 205 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 AP1M1Q9BXS5 423 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 SLC22A11Q9NSA0 550 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 SMARCAL1Q9NZC9 954 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 OR6C2Q9NZP2 312 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 SRPK3Q9UPE1 567 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 PCDHGA10Q9Y5H3 936 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 COPG1Q9Y678 874 aaKnown RBP13.29□□□□□ -0.28
CXCL12-202ENST00000374426 SVILO95425 2214 aa13.29□□□□□ -0.28
CXCL12-202ENST00000374426 APCP25054 2843 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 BHMG1C9JSJ3 638 aaPredicted RBP13.28□□□□□ -0.28
CXCL12-202ENST00000374426 IPO13O94829 963 aaKnown RBP13.28□□□□□ -0.28
CXCL12-202ENST00000374426 CTNNA2P26232 953 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 PEBP1P30086 187 aaKnown RBP13.28□□□□□ -0.28
CXCL12-202ENST00000374426 NSG1P42857 185 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 POU6F1Q14863 301 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 BRD3Q15059 726 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 TLDC1Q6P9B6 456 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 NAPRTQ6XQN6 538 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 ZADH2Q8N4Q0 377 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 OR5K2Q8NHB8 316 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 UBE2Q2Q8WVN8 375 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 TM9SF4Q92544 642 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 ATP13A2Q9NQ11 1180 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 TXLNGQ9NUQ3 528 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 POLG2Q9UHN1 485 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 PLAGL1Q9UM63 463 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 TDRKHQ9Y2W6 561 aaKnown RBP13.28□□□□□ -0.28
CXCL12-202ENST00000374426 PCDHA13Q9Y5I0 950 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 CSAG2Q9Y5P2 127 aa13.28□□□□□ -0.28
CXCL12-202ENST00000374426 PCM1Q15154 2024 aa13.27□□□□□ -0.28
CXCL12-202ENST00000374426 DOCK10Q96BY6 2186 aa13.27□□□□□ -0.28
CXCL12-202ENST00000374426 SLC5A10A0PJK1 596 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 ENO4A6NNW6 628 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 AGPSO00116 658 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 KLHL41O60662 606 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 AP2A1O95782 977 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 ITGAXP20702 1163 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 PSMA3P25788 255 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 GCGRP47871 477 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 CYP2A13Q16696 494 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 SLC5A12Q1EHB4 618 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 AADACL2Q6P093 401 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 FAM20CQ8IXL6 584 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 TC2NQ8N9U0 490 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 STYXQ8WUJ0 223 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 ELMO1Q92556 727 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 ALG3Q92685 438 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 NDC1Q9BTX1 674 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 PIH1D1Q9NWS0 290 aaKnown RBP13.27□□□□□ -0.29
CXCL12-202ENST00000374426 IRAK4Q9NWZ3 460 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 PLCL2Q9UPR0 1127 aa13.27□□□□□ -0.29
CXCL12-202ENST00000374426 CCDC78A2IDD5 438 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 MROH6A6NGR9 719 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 OR51F1A6NGY5 319 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 ISM1B1AKI9 464 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 QSOX1O00391 747 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 METTL18O95568 372 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 FTH1P02794 183 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 MAGP20916 626 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 GLRBP48167 497 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 AIMP2Q13155 320 aaKnown RBP13.26□□□□□ -0.29
CXCL12-202ENST00000374426 ELOAQ14241 798 aaKnown RBP13.26□□□□□ -0.29
CXCL12-202ENST00000374426 ITIH4Q14624 930 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 KIR2DS3Q14952 304 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 PARP6Q2NL67 630 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 PACS1Q6VY07 963 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 OTOGQ6ZRI0 2925 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 ARHGEF18Q6ZSZ5 1173 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 TICAM1Q8IUC6 712 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 NACC2Q96BF6 587 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 WDR77Q9BQA1 342 aaPredicted RBP13.26□□□□□ -0.29
CXCL12-202ENST00000374426 LRRC40Q9H9A6 602 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 EURLQ9NYK6 297 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 FBXL4Q9UKA2 621 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 KLHL20Q9Y2M5 609 aa13.26□□□□□ -0.29
CXCL12-202ENST00000374426 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 ALOX12BO75342 701 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 TJP3O95049 919 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 ALAS2P22557 587 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 MMP11P24347 488 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 ITGA3P26006 1051 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 MSNP26038 577 aaKnown RBP13.25□□□□□ -0.29
CXCL12-202ENST00000374426 PKLRP30613 574 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 FOXN2P32314 431 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 RWDD2BP57060 319 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 PLOD1Q02809 727 aaPredicted RBP13.25□□□□□ -0.29
CXCL12-202ENST00000374426 SPA17Q15506 151 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 HIF1AQ16665 826 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 PRAMEF13Q5VWM6 474 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
CXCL12-202ENST00000374426 OVCH1Q7RTY7 1134 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms