RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 RSL24D1Q9UHA3 163 aaKnown RBP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TMCC3Q9ULS5 477 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 FAM155AB1AL88 458 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 H3BSA7 217 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 WNT9AO14904 365 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 EIF2S1P05198 315 aaKnown RBP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 MERTKQ12866 999 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 FAM91A1Q658Y4 838 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 LARP4Q71RC2 724 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 RETREG3Q86VR2 466 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
CLIC4-201ENST00000374379 SFRP1Q8N474 314 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TRPV3Q8NET8 790 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 OR5AK3PQ8NH89 298 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 PPCDCQ96CD2 204 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 FERD3LQ96RJ6 166 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 SLC29A1Q99808 456 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 YIPF2Q9BWQ6 316 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 AHSPQ9NZD4 102 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 ACTR3BQ9P1U1 418 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 USP22Q9UPT9 525 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
CLIC4-201ENST00000374379 TNS1Q9HBL0 1735 aaKnown RBP13.24□□□□□ -0.29
CLIC4-201ENST00000374379 BCL10O95999 233 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 THRBP10828 461 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 ACADVLP49748 655 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 ATP1A4Q13733 1029 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 LHX8Q68G74 356 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 KIAA1324Q6UXG2 1013 aaKnown RBP13.24□□□□□ -0.29
CLIC4-201ENST00000374379 RNF175Q8N4F7 328 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 TBC1D19Q8N5T2 526 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 RORBQ92753 470 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 TIFAQ96CG3 184 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 POPDC3Q9HBV1 291 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 ZNF229Q9UJW7 825 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 AQP12BA6NM10 295 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 AHCYL1O43865 530 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 C8GP07360 202 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 BLOC1S3Q6QNY0 202 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 GAREM2Q75VX8 874 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 AQP12AQ8IXF9 295 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 REPS1Q96D71 796 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 AIG1Q9NVV5 245 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 FBP2O00757 339 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 H6PDO95479 791 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 PRNPP04156 253 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 HMGA1P17096 107 aaKnown RBP13.24□□□□□ -0.29
CLIC4-201ENST00000374379 LDLRAP1Q5SW96 308 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 FAM180BQ6P0A1 224 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 TEX26Q8N6G2 289 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 PHC3Q8NDX5 983 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 TMBIM1Q969X1 311 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 OR51B5Q9H339 312 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 SPHK2Q9NRA0 654 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 ZIM2Q9NZV7 527 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 PDP1Q9P0J1 537 aaPredicted RBP13.24□□□□□ -0.29
CLIC4-201ENST00000374379 IL36AQ9UHA7 158 aa13.24□□□□□ -0.29
CLIC4-201ENST00000374379 SLC6A2P23975 617 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 PLA2G16P53816 162 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 NUP107P57740 925 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 HPCAP84074 193 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 MAPK11Q15759 364 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 KCTD21Q4G0X4 260 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 CTSL3PQ5NE16 218 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 PDE12Q6L8Q7 609 aaKnown RBP13.23□□□□□ -0.29
CLIC4-201ENST00000374379 OR14C36Q8NHC7 312 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 CHCHD3Q9NX63 227 aaKnown RBP13.23□□□□□ -0.29
CLIC4-201ENST00000374379 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 MAP1BP46821 2468 aaKnown RBP13.23□□□□□ -0.29
CLIC4-201ENST00000374379 IGLV3-10A0A075B6K4 115 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 ISM1B1AKI9 464 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 ZNF195O14628 629 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 IL6P05231 212 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 ACADMP11310 421 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 MAGEA12P43365 314 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 EMX2Q04743 252 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 CXorf57Q6NSI4 855 aaKnown RBP13.23□□□□□ -0.29
CLIC4-201ENST00000374379 AGTRAPQ6RW13 159 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 ERMP1Q7Z2K6 904 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 ZDHHC21Q8IVQ6 265 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 TMCO5AQ8N6Q1 288 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 LKAAEAR1Q8TD35 194 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 TOP1MTQ969P6 601 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 EXOSC8Q96B26 276 aaKnown RBP13.23□□□□□ -0.29
CLIC4-201ENST00000374379 PKMYT1Q99640 499 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 DUSP12Q9UNI6 340 aa13.23□□□□□ -0.29
CLIC4-201ENST00000374379 TESMINQ9Y4I5 508 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms