RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 KRT87PA6NCN2 255 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 PABPN1LA6NDY0 278 aaKnown RBP12.47□□□□□ -0.41
GJB1-202ENST00000374022 SYCE1LA8MT33 242 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 SUPT3HB4E1H0 165 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 TARM1B6A8C7 271 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 UBXN8O00124 270 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 NOBOXO60393 691 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 LRP3O75074 770 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 SUPT3HO75486 399 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 RPIAP49247 311 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 TTC23LQ6PF05 361 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 MAPK15Q8TD08 544 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 SH3GL3Q99963 347 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 RDH14Q9HBH5 336 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 NKIRAS1Q9NYS0 192 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 NUDT4Q9NZJ9 180 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 CPNE7Q9UBL6 633 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 TDRKHQ9Y2W6 561 aaKnown RBP12.47□□□□□ -0.41
GJB1-202ENST00000374022 COLEC10Q9Y6Z7 277 aa12.47□□□□□ -0.41
GJB1-202ENST00000374022 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 NCF1BA6NI72 391 aaPredicted RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 NCF1CA8MVU1 366 aaPredicted RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 PCDHGA12O60330 932 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 GUCA1CO95843 209 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 HIST1H2AGP0C0S8 130 aaPredicted RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 ZNF883P0CG24 379 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 ALPPL2P10696 532 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 MTHFD2P13995 350 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 NCF1P14598 390 aaPredicted RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 XRCC1P18887 633 aaPredicted RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 HIST1H2ADP20671 130 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 NDUFS1P28331 727 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 ETV4P43268 484 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 ATP1A2P50993 1020 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 AP1S2P56377 157 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 UBE2IP63279 158 aaKnown RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 GUCY1A3Q02108 690 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 PRKG2Q13237 762 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 BIRC2Q13490 618 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 CSRP2Q16527 193 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 MBOAT1Q6ZNC8 495 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 SLC9B2Q86UD5 537 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 KYQ8NBH2 561 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 RDH11Q8TC12 318 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 ITFG2Q969R8 447 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 RAD51AP1Q96B01 352 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 HIST1H2AHQ96KK5 128 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 HIST1H2AJQ99878 128 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 EGFL8Q99944 293 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 H2AFJQ9BTM1 129 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 DUSP23Q9BVJ7 150 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 MLXIPLQ9NP71 852 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 POT1Q9NUX5 634 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 DNAAF2Q9NVR5 837 aaKnown RBP12.46□□□□□ -0.42
GJB1-202ENST00000374022 ARL15Q9NXU5 204 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 CD274Q9NZQ7 290 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 CIDEBQ9UHD4 219 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 MID2Q9UJV3 735 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 RP1P56715 2156 aa12.46□□□□□ -0.42
GJB1-202ENST00000374022 PROB1E7EW31 1015 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 SMIM24O75264 130 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 VIPP01282 170 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 S100BP04271 92 aaPredicted RBP12.45□□□□□ -0.42
GJB1-202ENST00000374022 GFAPP14136 432 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 TAC1P20366 129 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 PAX7P23759 505 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 MAZP56270 477 aaKnown RBP12.45□□□□□ -0.42
GJB1-202ENST00000374022 CDKL1Q00532 357 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 ZYG11AQ6WRX3 759 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 C17orf82Q86X59 251 aaPredicted RBP12.45□□□□□ -0.42
GJB1-202ENST00000374022 AVL9Q8NBF6 648 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 PDPRQ8NCN5 879 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 GPR156Q8NFN8 814 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 OR9A1PQ8NGU1 263 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 OR4C6Q8NH72 309 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 MDM1Q8TC05 714 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 CAMK1GQ96NX5 476 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 PKP4Q99569 1192 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 EDEM2Q9BV94 578 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 PARD6AQ9NPB6 346 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 COPG2Q9UBF2 871 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 POLG2Q9UHN1 485 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
GJB1-202ENST00000374022 G3V2L1 256 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 TRIM38O00635 465 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 ANXA5P08758 320 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 TPBGLP0DKB5 382 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 MYL2P10916 166 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 EZRP15311 586 aaKnown RBP12.45□□□□□ -0.42
GJB1-202ENST00000374022 FASLGP48023 281 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 HHEXQ03014 270 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 GRB7Q14451 532 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 PCLAFQ15004 111 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 C14orf28Q4W4Y0 310 aa12.45□□□□□ -0.42
GJB1-202ENST00000374022 ZCCHC8Q6NZY4 707 aaKnown RBP12.45□□□□□ -0.42
GJB1-202ENST00000374022 SLC35F3Q8IY50 421 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms