RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 L3MBTL4Q8NA19 623 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 NUDT8Q8WV74 236 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 TRIM8Q9BZR9 551 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 KLHL4Q9C0H6 718 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 LRTM1Q9HBL6 345 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 RIMS3Q9UJD0 308 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 C1QTNF3-AMACRE9PGA6 284 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 LILRB5O75023 590 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 PDYNP01213 254 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 HSD17B1P14061 328 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 PSMC3P17980 439 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 JAK1P23458 1154 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 MAP4P27816 1152 aaKnown RBP19.09■□□□□ 0.65
HDAC1-201ENST00000373548 PDHA2P29803 388 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 DPTQ07507 201 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 RAB30Q15771 203 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 BCL7AQ4VC05 210 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 SFT2D3Q587I9 215 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 HOMEZQ8IX15 550 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 SLC22A15Q8IZD6 547 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 LILRA2Q8N149 483 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 N4BP2L2Q92802 583 aaPredicted RBP19.09■□□□□ 0.65
HDAC1-201ENST00000373548 TMEM125Q96AQ2 219 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 ACPTQ9BZG2 426 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 OR2AG1Q9H205 316 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 VCX3BQ9H321 246 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 SLAMF8Q9P0V8 285 aa19.09■□□□□ 0.65
HDAC1-201ENST00000373548 EIF3LQ9Y262 564 aaKnown RBP19.09■□□□□ 0.65
HDAC1-201ENST00000373548 DYTNA2CJ06 578 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 RHDQ02161 417 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 CNTN1Q12860 1018 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 MAD2L1Q13257 205 aaPredicted RBP19.08■□□□□ 0.64
HDAC1-201ENST00000373548 ADGRE1Q14246 886 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 CCSMST1Q4G0I0 132 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 COL13A1Q5TAT6 717 aaPredicted RBP19.08■□□□□ 0.64
HDAC1-201ENST00000373548 OGFRL1Q5TC84 451 aaPredicted RBP19.08■□□□□ 0.64
HDAC1-201ENST00000373548 ANO7Q6IWH7 933 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 SLC2A7Q6PXP3 512 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 CYP2R1Q6VVX0 501 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 PDSS2Q86YH6 399 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 DNAJB14Q8TBM8 379 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 HDAC8Q9BY41 377 aa19.08■□□□□ 0.64
HDAC1-201ENST00000373548 COPS7BQ9H9Q2 264 aaPredicted RBP19.08■□□□□ 0.64
HDAC1-201ENST00000373548 TCRBV3S1A0A5B6 114 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 SEC22BO75396 215 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 EIF2DP41214 584 aaKnown RBP19.07■□□□□ 0.64
HDAC1-201ENST00000373548 CASP2P42575 452 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 BDKRB1P46663 353 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 PTGR1Q14914 329 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 PARM1Q6UWI2 310 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 DHFR2Q86XF0 187 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 KIAA2013Q8IYS2 634 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 SELENOMQ8WWX9 145 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 FGF14Q92915 247 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 ZCCHC2Q9C0B9 1178 aaKnown RBP19.07■□□□□ 0.64
HDAC1-201ENST00000373548 C1orf109Q9NX04 203 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 ASIC5Q9NY37 505 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 SNX6Q9UNH7 406 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 FADS3Q9Y5Q0 445 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 PEX1O43933 1283 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 CATP04040 527 aaKnown RBP19.07■□□□□ 0.64
HDAC1-201ENST00000373548 VARSP26640 1264 aaKnown RBP19.07■□□□□ 0.64
HDAC1-201ENST00000373548 GDI1P31150 447 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 GRIA2P42262 883 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 NEK2P51955 445 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 DGKQP52824 942 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 KIAA0040Q15053 153 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 RABL3Q5HYI8 236 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 DPP10Q8N608 796 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 PKP2Q99959 881 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 ELOVL6Q9H5J4 265 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 INTS7Q9NVH2 962 aaKnown RBP19.07■□□□□ 0.64
HDAC1-201ENST00000373548 STOX2Q9P2F5 926 aaPredicted RBP19.07■□□□□ 0.64
HDAC1-201ENST00000373548 CIDEBQ9UHD4 219 aa19.07■□□□□ 0.64
HDAC1-201ENST00000373548 GRXCR2A6NFK2 248 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 ARNTLO00327 626 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 NPC1O15118 1278 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 ATP6V1B2P21281 511 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 CHIT1Q13231 466 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 PIP5KL1Q5T9C9 394 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 AGTRAPQ6RW13 159 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 SUSD1Q6UWL2 747 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 TRAPPC5Q8IUR0 188 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 LIX1Q8N485 282 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 CXorf40AQ8TE69 158 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 ELSPBP1Q96BH3 223 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 LRGUKQ96M69 825 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 CCDC138Q96M89 665 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 RPP25Q9BUL9 199 aaKnown RBP19.06■□□□□ 0.64
HDAC1-201ENST00000373548 TRIM39Q9HCM9 518 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 ATXN10Q9UBB4 475 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 CKAP5Q14008 2032 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 RNASEH2AO75792 299 aaKnown RBP19.06■□□□□ 0.64
HDAC1-201ENST00000373548 WASP42768 502 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 PLA2G4EQ3MJ16 856 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 SPATS1Q496A3 300 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 ATAT1Q5SQI0 421 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 CACHD1Q5VU97 1274 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 XKR5Q6UX68 686 aa19.06■□□□□ 0.64
HDAC1-201ENST00000373548 THOC6Q86W42 341 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms