RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ETV3P41162 512 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 PATL1Q86TB9 770 aaKnown RBP17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 PGBD3Q8N328 593 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 C12orf43Q96C57 262 aaKnown RBP17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 PRICKLE1Q96MT3 831 aaPredicted RBP17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 MANBAO00462 879 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 GRM6O15303 877 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 CSF2RAP15509 400 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 ZNF182P17025 639 aaPredicted RBP17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 ENTPD1P49961 510 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 DAG1Q14118 895 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 SELPLGQ14242 412 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 LY6G5CQ5SRR4 150 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 CCDC149Q6ZUS6 474 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 NXPE1Q8N323 547 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 CHST14Q8NCH0 376 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 OR4K1Q8NGD4 311 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 WFDC5Q8TCV5 224 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 L3HYPDHQ96EM0 354 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 TOR3AQ9H497 397 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 EPB41L1Q9H4G0 881 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 RAD21L1Q9H4I0 556 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 POP4O95707 220 aaKnown RBP17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 SLC16A1P53985 500 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 CES5AQ6NT32 575 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 PIK3C3Q8NEB9 887 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 EGLN2Q96KS0 407 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 APOL4Q9BPW4 351 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 RPF2Q9H7B2 306 aaKnown RBP17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 HCFC1R1Q9NWW0 138 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
TRAF3IP1-201ENST00000373327 S100A5P33763 92 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 GRIA2P42262 883 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 TRPC1P48995 793 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 NTHL1P78549 312 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 PAGE2BQ5JRK9 111 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 KANK2Q63ZY3 851 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 C1orf52Q8N6N3 182 aaKnown RBP17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 FOXJ1Q92949 421 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 MAP10Q9P2G4 905 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 IKZF3Q9UKT9 509 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 NADKO95544 446 aaPredicted RBP17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 TFAP2AP05549 437 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 HPCAL1P37235 193 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 NUDT6P53370 316 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 MGAT3Q09327 533 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 C2orf80Q0P641 193 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 SYT16Q17RD7 645 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 FAM9CQ8IZT9 166 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 LKAAEAR1Q8TD35 194 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 GTPBP3Q969Y2 492 aaKnown RBP17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 SDR39U1Q9NRG7 319 aaPredicted RBP17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 VAPAQ9P0L0 249 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 TPRKBQ9Y3C4 175 aa17.27■□□□□ 0.36
TRAF3IP1-201ENST00000373327 MROH6A6NGR9 719 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DSC1Q08554 894 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 USP39Q53GS9 565 aaKnown RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TMEM25Q86YD3 366 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ACDQ96AP0 544 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CASD1Q96PB1 797 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CD244Q9BZW8 370 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ABCB10Q9NRK6 738 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 IL17CQ9P0M4 197 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TMCC3Q9ULS5 477 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PLAGL1Q9UM63 463 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PLK4O00444 970 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PDYNP01213 254 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PABPC1P11940 636 aaKnown RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ENGP17813 658 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZNF140P52738 457 aaPredicted RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 EEFSECP57772 596 aaKnown RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CSTF3Q12996 717 aaKnown RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DTWD1Q8N5C7 304 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 LINC01599Q8WXQ3 324 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZFYVE19Q96K21 471 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 REXO4Q9GZR2 422 aaKnown RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DDX28Q9NUL7 540 aaKnown RBP17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZIM2Q9NZV7 527 aa17.27■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ATG2BQ96BY7 2078 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 NPIPB15A6NHN6 443 aaPredicted RBP17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CLIC1O00299 241 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 SUV39H1O43463 412 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 IER5LQ5T953 404 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MANEALQ5VSG8 457 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 HMGN2P46Q86SG4 172 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 DCAF4L2Q8NA75 395 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 OR2T11Q8NH01 316 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 NACC2Q96BF6 587 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 ZNF382Q96SR6 550 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CLSTN3Q9BQT9 956 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 MARCH5Q9NX47 278 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CHCHD3Q9NX63 227 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 CLCA2Q9UQC9 943 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 PDE10AQ9Y233 779 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 BCKDHAP12694 445 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 HMGCLP35914 325 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 GANABQ14697 944 aaKnown RBP17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 TEAD2Q15562 447 aa17.26■□□□□ 0.35
TRAF3IP1-201ENST00000373327 FAM81AQ8TBF8 368 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms