RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MARCH8Q5T0T0 291 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 THAP5Q7Z6K1 395 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 IZUMO1Q8IYV9 350 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 CDK20Q8IZL9 346 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 SVOPQ8N4V2 548 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 FAR1Q8WVX9 515 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 OR8D1Q8WZ84 308 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 FAXDC2Q96IV6 333 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 TRIM39Q9HCM9 518 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 TRNAU1APQ9NX07 287 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 DUS2Q9NX74 493 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 GULP1Q9UBP9 304 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 RPL26L1Q9UNX3 145 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 MYH9P35579 1960 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 A0A1W2PPW3 197 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 TNFRSF11BO00300 401 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 DFNA5O60443 496 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 ENO2P09104 434 aaPredicted RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 RPL4P36578 427 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 HTR6P50406 440 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 MAPK12P53778 367 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 C1QTNF8P60827 252 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 CDC42P60953 191 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 ZXDBP98169 803 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 MS4A2Q01362 244 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 RAPSNQ13702 412 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 RGS21Q2M5E4 152 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 CLEC12AQ5QGZ9 265 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 UBXN11Q5T124 520 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 INTS11Q5TA45 600 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 C7orf61Q8IZ16 206 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 PTCD2Q8WV60 388 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 TMBIM1Q969X1 311 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 FUBP3Q96I24 572 aaKnown RBP eCLIP8.92□□□□□ -0.983e-7■■■□□ 17.9
SMARCA1-202ENST00000371122 CGREF1Q99674 301 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 KIFC1Q9BW19 673 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 MFSD1Q9H3U5 465 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 DPEP2Q9H4A9 486 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 HMG20AQ9NP66 347 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 SRRDQ9UH36 339 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 NDRG2Q9UN36 371 aaKnown RBP8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 PCDHB1Q9Y5F3 818 aa8.92□□□□□ -0.98
SMARCA1-202ENST00000371122 K7EPI3 171 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 XPNPEP2O43895 674 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 CSF2RAP15509 400 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 PTGER1P34995 402 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 DGKGP49619 791 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 STC1P52823 247 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 FOXA1P55317 472 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 MEP1AQ16819 746 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 USP39Q53GS9 565 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TRIQKQ629K1 86 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TRIM40Q6P9F5 258 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 KLHL17Q6TDP4 642 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 SPATA19Q7Z5L4 167 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TSPAN33Q86UF1 283 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 COMMD2Q86X83 199 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 ATP6V1C2Q8NEY4 427 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 LMLNQ96KR4 655 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 KCNC2Q96PR1 638 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TBX5Q99593 518 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 HEPHQ9BQS7 1158 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 PTGFRNQ9P2B2 879 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 B4GALT6Q9UBX8 382 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 FETUBQ9UGM5 382 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 KCNK6Q9Y257 313 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 OTOFQ9HC10 1997 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 PHIPQ8WWQ0 1821 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 C1QTNF3-AMACRE9PGA6 284 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 SOX14O95416 240 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 CH25HO95992 272 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 NSG1P42857 185 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 RAB8AP61006 207 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 MERTKQ12866 999 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 SERINC3Q13530 473 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 CCNIQ14094 377 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TLR1Q15399 786 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 CES5AQ6NT32 575 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 FAM180AQ6UWF9 173 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 FAM43BQ6ZT52 329 aaPredicted RBP8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 SLC43A3Q8NBI5 491 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 ZNF671Q8TAW3 534 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 MAGEC3Q8TD91 643 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 HPS1Q92902 700 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 RAB8BQ92930 207 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 PMEPA1Q969W9 287 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 REPS1Q96D71 796 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 HSPBAP1Q96EW2 488 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TDRD1Q9BXT4 1180 aaKnown RBP8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 OSBPL6Q9BZF3 934 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 NDEL1Q9GZM8 345 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 MTMR10Q9NXD2 777 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 BTBD3Q9Y2F9 522 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 ZCWPW2A0A1B0GU75 182 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 MAGEB17A8MXT2 336 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 SCN2BO60939 215 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 H6PDO95479 791 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 SNAP29O95721 258 aa8.91□□□□□ -0.98
SMARCA1-202ENST00000371122 FGBP02675 491 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms