RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 XKR7Q5GH72 579 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 PPFIBP2Q8ND30 876 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 MED8Q96G25 268 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 SHDQ96IW2 340 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 HBEGFQ99075 208 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 OSGEPL1Q9H4B0 414 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 C6orf106Q9H6K1 298 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-202ENST00000369409 ACTR8Q9H981 624 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 FGF22Q9HCT0 170 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 TRPS1Q9UHF7 1281 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 SUFUQ9UMX1 484 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 ASF1AQ9Y294 204 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 RNF11Q9Y3C5 154 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 MEI4A8MW99 385 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 ALDOCP09972 364 aaKnown RBP16.35■□□□□ 0.21
PHGDH-202ENST00000369409 EBLN1P0CF75 366 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 NQO1P15559 274 aaKnown RBP16.35■□□□□ 0.21
PHGDH-202ENST00000369409 KIAA1024LP59773 190 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 NAE1Q13564 534 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 GRB7Q14451 532 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 METRNLQ641Q3 311 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 IL27RAQ6UWB1 636 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 UNC5DQ6UXZ4 953 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 OR2T11Q8NH01 316 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 MAFAQ8NHW3 353 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-202ENST00000369409 TOE1Q96GM8 510 aaKnown RBP16.35■□□□□ 0.21
PHGDH-202ENST00000369409 UHRF1Q96T88 793 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-202ENST00000369409 TIMM29Q9BSF4 260 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 TPSD1Q9BZJ3 242 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 RMI1Q9H9A7 625 aa16.35■□□□□ 0.21
PHGDH-202ENST00000369409 SCAMP1O15126 338 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 SLC35G4P0C7Q5 338 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 CD1EP15812 388 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 RPL10P27635 214 aaKnown RBP16.34■□□□□ 0.21
PHGDH-202ENST00000369409 GNPDA1P46926 289 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 DMPKQ09013 629 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 NFATC4Q14934 902 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 GCNT7Q6ZNI0 430 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
PHGDH-202ENST00000369409 OR5AR1Q8NGP9 310 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 FBXO27Q8NI29 283 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 CMTM5Q96DZ9 223 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 PDXPQ96GD0 296 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 MIPEPQ99797 713 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 INTS7Q9NVH2 962 aaKnown RBP16.34■□□□□ 0.21
PHGDH-202ENST00000369409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.34■□□□□ 0.219e-8■■■□□ 19.1
PHGDH-202ENST00000369409 KLQ9UEF7 1012 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 PRDM4Q9UKN5 801 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 KCNK6Q9Y257 313 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 PLEKHM1Q9Y4G2 1056 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 GPSM3Q9Y4H4 160 aa16.34■□□□□ 0.21
PHGDH-202ENST00000369409 CFAP20Q9Y6A4 193 aaKnown RBP16.34■□□□□ 0.21
PHGDH-202ENST00000369409 PRSS38A1L453 326 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 KLHL33A6NCF5 533 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 B2RBV5 119 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 SLC22A2O15244 555 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 VPS4BO75351 444 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 CLDN9O95484 217 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 KRT16P08779 473 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 COX4I1P13073 169 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 LBPP18428 481 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 AKT2P31751 481 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 SQLEQ14534 574 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 PYCR3Q53H96 274 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 TPRG1LQ5T0D9 272 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 OR56A3Q8NH54 315 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 ZNF480Q8WV37 535 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 TFGQ92734 400 aaPredicted RBP16.33■□□□□ 0.21
PHGDH-202ENST00000369409 BMFQ96LC9 184 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 BTBD10Q9BSF8 475 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 TBC1D10AQ9BXI6 508 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 EBF2Q9HAK2 575 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 PFDN4Q9NQP4 134 aa16.33■□□□□ 0.21
PHGDH-202ENST00000369409 LOC100653049A0A140TA62 436 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 C10orf142B7Z368 130 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 IFRD1O00458 451 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-202ENST00000369409 GYG2O15488 501 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 PEX11AO75192 247 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 KRT34O76011 436 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 IGHV4-34P06331 123 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 HOXC4P09017 264 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-202ENST00000369409 PRR35P0CG20 571 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 PRDX6P30041 224 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 ADSLP30566 484 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-202ENST00000369409 CLCNKAP51800 687 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 TBPL1P62380 186 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 MXRA7P84157 204 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 ABRAXAS2Q15018 415 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 SNX32Q86XE0 403 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 DCUN1D3Q8IWE4 304 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 KLHDC8AQ8IYD2 350 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 SYTL1Q8IYJ3 562 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 CHCHD4Q8N4Q1 142 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 RBM15BQ8NDT2 890 aaKnown RBP16.33■□□□□ 0.2
PHGDH-202ENST00000369409 PHC3Q8NDX5 983 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 OR9A1PQ8NGU1 263 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 SLC29A3Q9BZD2 475 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 TBC1D17Q9HA65 648 aa16.33■□□□□ 0.2
PHGDH-202ENST00000369409 CARS2Q9HA77 564 aaKnown RBP16.33■□□□□ 0.2
PHGDH-202ENST00000369409 RIC8BQ9NVN3 520 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms