RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 KATNA1O75449 491 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 RPN2P04844 631 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 IDSP22304 550 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 RPL6Q02878 288 aaKnown RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 PTK2BQ14289 1009 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 GRB7Q14451 532 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 SLC36A4Q6YBV0 504 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR4F6Q8NGB9 312 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR5AR1Q8NGP9 310 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR56A3Q8NH54 315 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR5K2Q8NHB8 316 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 TWIST2Q8WVJ9 160 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 CDK15Q96Q40 435 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 CCDC28BQ9BUN5 200 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 NTMT1Q9BV86 223 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 NMUR2Q9GZQ4 415 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 WDR55Q9H6Y2 383 aaPredicted RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 TCF7L2Q9NQB0 619 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 DNAJC11Q9NVH1 559 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 CIDEBQ9UHD4 219 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 DGKBQ9Y6T7 804 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 EML5Q05BV3 1969 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 THEGLP0DJG4 465 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 UROSP10746 265 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 AOC1P19801 751 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 EPHA3P29320 983 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 HOXA6P31267 233 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 CCNG1P51959 295 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 DMWDQ09019 674 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 CDC16Q13042 620 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 USP39Q53GS9 565 aaKnown RBP23.22■■□□□ 1.31
SNX3-203ENST00000368979 CLNKQ7Z7G1 428 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 DEFB119Q8N690 84 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 ZNF480Q8WV37 535 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 ATP6V1E2Q96A05 226 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 RAD51AP1Q96B01 352 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 PPP1R36Q96LQ0 422 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 INSM2Q96T92 566 aaPredicted RBP23.22■■□□□ 1.31
SNX3-203ENST00000368979 ZFP69BQ9UJL9 534 aa23.22■■□□□ 1.31
SNX3-203ENST00000368979 GOLGA8QA0A0J9YX86 632 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 SPTY2D1-AS1A0A0U1RR47 76 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 GOLGA8OA6NCC3 632 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 GOLGA8NF8WBI6 632 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 FCHO1O14526 889 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 CRCPO75575 148 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 SERPINA6P08185 405 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 LSM12Q3MHD2 195 aaKnown RBP23.21■■□□□ 1.31
SNX3-203ENST00000368979 GALNTL6Q49A17 601 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 CCDC121Q6ZUS5 278 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 ACAD11Q709F0 780 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 EFL1Q7Z2Z2 1120 aaKnown RBP23.21■■□□□ 1.31
SNX3-203ENST00000368979 CHCHD4Q8N4Q1 142 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 GBP7Q8N8V2 638 aaPredicted RBP23.21■■□□□ 1.31
SNX3-203ENST00000368979 DCBLD1Q8N8Z6 715 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 PHC3Q8NDX5 983 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 PRR11Q96HE9 360 aaPredicted RBP23.21■■□□□ 1.31
SNX3-203ENST00000368979 TRNAU1APQ9NX07 287 aaKnown RBP23.21■■□□□ 1.31
SNX3-203ENST00000368979 SLC22A14Q9Y267 594 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 TIMM22Q9Y584 194 aa23.21■■□□□ 1.31
SNX3-203ENST00000368979 CFAP20Q9Y6A4 193 aaKnown RBP23.21■■□□□ 1.31
SNX3-203ENST00000368979 CCDC22O60826 627 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 UBOX5O94941 541 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 ENO1P06733 434 aaKnown RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 EBLN1P0CF75 366 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 BCKDHBP21953 392 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 ITPKAP23677 461 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 CTBSQ01459 385 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 DMTNQ08495 405 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 EIF2B5Q13144 721 aaKnown RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 NAE1Q13564 534 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 CLCA4Q14CN2 919 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 UAP1L1Q3KQV9 507 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 SPDYAQ5MJ70 313 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 FAM91A1Q658Y4 838 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 RD3Q7Z3Z2 195 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 MILR1Q7Z6M3 343 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 THOC6Q86W42 341 aaKnown RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 TBC1D21Q8IYX1 336 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 CDYL2Q8N8U2 506 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 SNX31Q8N9S9 440 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 C19orf60Q96EN9 201 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 KLHDC7BQ96G42 594 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 C12orf66Q96MD2 445 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 TMEM168Q9H0V1 697 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 TRIT1Q9H3H1 467 aaKnown RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 TUBB1Q9H4B7 451 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 PRMT8Q9NR22 394 aaPredicted RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 AASDHPPTQ9NRN7 309 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 INTS7Q9NVH2 962 aaKnown RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 SPATA6Q9NWH7 488 aaPredicted RBP23.2■■□□□ 1.3
SNX3-203ENST00000368979 TRPS1Q9UHF7 1281 aa23.2■■□□□ 1.3
SNX3-203ENST00000368979 CCDC163A0A0D9SF12 145 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 RASGRP1O95267 797 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 CAPN1P07384 714 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 ERGP11308 486 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 FZD2Q14332 565 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 METTL21CQ5VZV1 264 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 DUS1LQ6P1R4 473 aaKnown RBP23.19■■□□□ 1.3
SNX3-203ENST00000368979 WASH2PQ6VEQ5 465 aa23.19■■□□□ 1.3
SNX3-203ENST00000368979 HID1Q8IV36 788 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms