RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TMX2-CTNND1H3BSU7 103 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 SNNO75324 88 aaPredicted RBP9.75□□□□□ -0.85
TPM3-210ENST00000368530 PRAMEF1O95521 474 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 ITGB2P05107 769 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 LTA4HP09960 611 aaKnown RBP9.75□□□□□ -0.85
TPM3-210ENST00000368530 CTSEP14091 401 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 PNLIPP16233 465 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 GLB1P16278 677 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 BPIP17213 487 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 CA5AP35218 305 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 TRIM23P36406 574 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 MMP12P39900 470 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 TIAL1Q01085 375 aaKnown RBP eCLIP9.75□□□□□ -0.85
TPM3-210ENST00000368530 CACNG1Q06432 222 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 ELP6Q0PNE2 266 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 RALGDSQ12967 914 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 NFATC3Q12968 1075 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 DBN1Q16643 649 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 FAM83EQ2M2I3 478 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 SPRED3Q2MJR0 410 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 LRRC66Q68CR7 880 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 XKR5Q6UX68 686 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 NAPRTQ6XQN6 538 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 RFLNAQ6ZTI6 216 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 RD3Q7Z3Z2 195 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 CCDC91Q7Z6B0 441 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 C17orf82Q86X59 251 aaPredicted RBP9.75□□□□□ -0.85
TPM3-210ENST00000368530 GKN2Q86XP6 184 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 CRLF3Q8IUI8 442 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 SLITRK4Q8IW52 837 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 PELI3Q8N2H9 469 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 TMEM151AQ8N4L1 468 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 OR6C4Q8NGE1 309 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 RDH11Q8TC12 318 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 NAT14Q8WUY8 206 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 SREK1Q8WXA9 508 aaKnown RBP9.75□□□□□ -0.85
TPM3-210ENST00000368530 CCT6BQ92526 530 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 EXT2Q93063 718 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 ECHDC3Q96DC8 303 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 ZNF641Q96N77 438 aaPredicted RBP9.75□□□□□ -0.85
TPM3-210ENST00000368530 TMEM74Q96NL1 305 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 TMEM120AQ9BXJ8 343 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 SYNDIG1Q9H7V2 258 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 FGF22Q9HCT0 170 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 THAP1Q9NVV9 213 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 FOXJ2Q9P0K8 574 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 B4GALT6Q9UBX8 382 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 IL17BQ9UHF5 180 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 CORO1CQ9ULV4 474 aaPredicted RBP9.75□□□□□ -0.85
TPM3-210ENST00000368530 DNAJC16Q9Y2G8 782 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 USH1CQ9Y6N9 552 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 PIKFYVEQ9Y2I7 2098 aa9.75□□□□□ -0.85
TPM3-210ENST00000368530 LRP4O75096 1905 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 PRAMEF33A0A0G2JMD5 474 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 GLYATL1P3A0A0U1RQE8 302 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 C9orf172C9J069 976 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 H7C0S8 307 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 GAPDHSO14556 408 aaPredicted RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 PFDN6O15212 129 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 SUV39H1O43463 412 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 B4GAT1O43505 415 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 DLX3O60479 287 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 PRAMEF10O60809 474 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 TRIM13O60858 407 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 NIPSNAP2O75323 286 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 UBOX5O94941 541 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 TNFP01375 233 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 FUCA1P04066 466 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 HOXC4P09017 264 aaPredicted RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 LIPCP11150 499 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 UGT1A6P19224 532 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 ITGALP20701 1170 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 UGT1A1P22309 533 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 UGT1A4P22310 534 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 LHCGRP22888 699 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 GRK2P25098 689 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 ARRB2P32121 409 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 UGT1A3P35503 534 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 CCR10P46092 362 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 TTPAP49638 278 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 KPNA2P52292 529 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 ARFIP2P53365 341 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 PRSS12P56730 875 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 ABCE1P61221 599 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 NFKB2Q00653 900 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 B4GALNT1Q00973 533 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 CHRNA6Q15825 494 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 AARS2Q5JTZ9 985 aaKnown RBP9.74□□□□□ -0.85
TPM3-210ENST00000368530 AGAP9Q5VTM2 703 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 KLC3Q6P597 504 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 ATG14Q6ZNE5 492 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 USP53Q70EK8 1073 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 SPRED1Q7Z699 444 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 LCA5Q86VQ0 697 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 ZFAND4Q86XD8 727 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 CCL4L1Q8NHW4 92 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM3-210ENST00000368530 SCRN2Q96FV2 425 aa9.74□□□□□ -0.85
TPM3-210ENST00000368530 WDR92Q96MX6 357 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms