RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 DNAJB14Q8TBM8 379 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 ATL1Q8WXF7 558 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 ZFYVE19Q96K21 471 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 CCM2Q9BSQ5 444 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 Q9H521 79 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 ALG2Q9H553 416 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 FARSBQ9NSD9 589 aaKnown RBP17.05■□□□□ 0.32
LMNA-205ENST00000368299 DZANK1Q9NVP4 752 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 ARMC1Q9NVT9 282 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 C1orf109Q9NX04 203 aa17.05■□□□□ 0.32
LMNA-205ENST00000368299 CLGNO14967 610 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 DENRO43583 198 aaKnown RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 PSIP1O75475 530 aaKnown RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 GRIA3P42263 894 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 CASP2P42575 452 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 HSPA13P48723 471 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 INPP5AQ14642 412 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 CPSF6Q16630 551 aaKnown RBP eCLIP17.04■□□□□ 0.32
LMNA-205ENST00000368299 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 FAM9CQ8IZT9 166 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 MARVELD2Q8N4S9 558 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 BEND7Q8N7W2 519 aaPredicted RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 RASGEF1AQ8N9B8 481 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 SLC45A3Q96JT2 553 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 UHRF1Q96T88 793 aaPredicted RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 ZCCHC2Q9C0B9 1178 aaKnown RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 ELOVL6Q9H5J4 265 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 TSPAN6O43657 245 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 SEC22BO75396 215 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 HMGCS1Q01581 520 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 ZXDCQ2QGD7 858 aaPredicted RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 AASDHQ4L235 1098 aaPredicted RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 PTRH1Q86Y79 214 aaKnown RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 KIAA2013Q8IYS2 634 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 SELENOMQ8WWX9 145 aa17.04■□□□□ 0.32
LMNA-205ENST00000368299 WRAP53Q9BUR4 548 aaKnown RBP17.04■□□□□ 0.32
LMNA-205ENST00000368299 TXNDC9O14530 226 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 UGDHO60701 494 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 RSL1D1O76021 490 aaKnown RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 ATP6V1B2P21281 511 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 ZNF33BQ06732 778 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 MESP2Q0VG99 397 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 SGO1Q5FBB7 561 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 NANOGP8Q6NSW7 305 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 SLCO4A1Q96BD0 722 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 CDCA3Q99618 268 aaPredicted RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 KCTD14Q9BQ13 255 aaPredicted RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 DPY30Q9C005 99 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 NANOGQ9H9S0 305 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 CCM2LQ9NUG4 571 aaPredicted RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 ZNHIT2Q9UHR6 403 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 RAB26Q9ULW5 256 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 SLC22A14Q9Y267 594 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 ITM2BQ9Y287 266 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 SLC5A10A0PJK1 596 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 SERTM1A2A2V5 107 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 NPIPB8E9PQR5 432 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 H0YJX3 145 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 AREL1O15033 823 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 CATP04040 527 aaKnown RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 IL6P05231 212 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 HLA-EP13747 358 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 PRPH2P23942 346 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 GRIA2P42262 883 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 GSK3BP49841 420 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 CTSCP53634 463 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 LIPEQ05469 1076 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 C9orf50Q5SZB4 431 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 ZNF648Q5T619 568 aaPredicted RBP17.03■□□□□ 0.32
LMNA-205ENST00000368299 AP1ARQ63HQ0 302 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 NEK5Q6P3R8 708 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 SLC2A7Q6PXP3 512 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 DSG4Q86SJ6 1040 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 NLRP8Q86W28 1048 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 TERB1Q8NA31 727 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 CCDC138Q96M89 665 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 FOPNLQ96NB1 174 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 TMEM245Q9H330 911 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 DYRK4Q9NR20 520 aa17.03■□□□□ 0.32
LMNA-205ENST00000368299 CHD7Q9P2D1 2997 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 KCNE1BA0A087WTH5 132 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 KANSL1LA0AUZ9 987 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 PDYNP01213 254 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 PWP1Q13610 501 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 ZNF234Q14588 700 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 KIAA0040Q15053 153 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 RABL3Q5HYI8 236 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 GET4Q7L5D6 327 aaPredicted RBP17.02■□□□□ 0.32
LMNA-205ENST00000368299 LIX1Q8N485 282 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 EME1Q96AY2 570 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 ARRDC3Q96B67 414 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 PYCR2Q96C36 320 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 ACPTQ9BZG2 426 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 EPB41L1Q9H4G0 881 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 TMED5Q9Y3A6 229 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 SNX13Q9Y5W8 968 aa17.02■□□□□ 0.32
LMNA-205ENST00000368299 ARPC2O15144 300 aa17.01■□□□□ 0.31
LMNA-205ENST00000368299 SPINT1O43278 529 aa17.01■□□□□ 0.31
LMNA-205ENST00000368299 ADRB3P13945 408 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms