RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PITPNAQ00169 270 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 PCBP1Q15365 356 aaKnown RBP eCLIP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 OGFRL1Q5TC84 451 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 VSTM1Q6UX27 236 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 HFE2Q6ZVN8 426 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 TMEM192Q8IY95 271 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 C7orf57Q8NEG2 295 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 OR2L3Q8NG85 312 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 BRSK1Q8TDC3 778 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 PTCD2Q8WV60 388 aaKnown RBP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 TSACCQ96A04 125 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 GPR21Q99679 349 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 ACE2Q9BYF1 805 aaPredicted RBP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 FAM83DQ9H4H8 585 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 EXD2Q9NVH0 621 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 KCTD5Q9NXV2 234 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 CHADO15335 359 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 SHBGP04278 402 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 RPL13AP40429 203 aaKnown RBP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 CASP6P55212 293 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 RPS24P62847 133 aaKnown RBP6.95□□□□□ -1.3
SPTA1-201ENST00000368147 VLDLRP98155 873 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 SCN1BQ07699 218 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 C1orf61Q13536 156 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 GTF2H2Q13888 395 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 GPR139Q6DWJ6 353 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 GTF2H2CQ6P1K8 395 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 ARHGAP36Q6ZRI8 547 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 COX18Q8N8Q8 333 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 OR2AJ1Q8NGZ0 328 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 TBC1D15Q8TC07 691 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 MAPK15Q8TD08 544 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 SNX27Q96L92 541 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 APOLD1Q96LR9 279 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 SEC61A2Q9H9S3 476 aa6.95□□□□□ -1.3
SPTA1-201ENST00000368147 FAM240BA0A1B0GVZ2 78 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 OR2AT4A6NND4 320 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 GRXCR1A8MXD5 290 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CHST10O43529 356 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CPN2P22792 545 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 RPL14P50914 215 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CLCN5P51795 746 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 NCBP2P52298 156 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ID2Q02363 134 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CACNG1Q06432 222 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TIGD5Q53EQ6 642 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PRRT3Q5FWE3 981 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 RAB43Q86YS6 212 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TOP1MTQ969P6 601 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 OXNAD1Q96HP4 312 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 HSFY1Q96LI6 401 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 VAT1Q99536 393 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 SP140LQ9H930 580 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TRPV5Q9NQA5 729 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PARPBPQ9NWS1 579 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 RICTORQ6R327 1708 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 NOMO3P69849 1222 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CSTF1Q05048 431 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 AUHQ13825 339 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 NOMO1Q15155 1222 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 UBAP2Q5T6F2 1119 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CLEC6AQ6EIG7 209 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ARPINQ7Z6K5 226 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 YTHDF3Q7Z739 585 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 C15orf40Q8WUR7 153 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 EZH1Q92800 747 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 BORCS5Q969J3 196 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 P2RY11Q96G91 374 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TBX5Q99593 518 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 C7orf50Q9BRJ6 194 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 A0A0U1RQJ8 604 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PPP1R11O60927 126 aaPredicted RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 UBXN7O94888 489 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TGFB1P01137 390 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PET100P0DJ07 73 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
SPTA1-201ENST00000368147 MARCKSL1P49006 195 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 LILRA4P59901 499 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ADAM8P78325 824 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ECH1Q13011 328 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CBX3Q13185 183 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PDGFRLQ15198 375 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 GARNL3Q5VVW2 1013 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CARD17Q5XLA6 110 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 IQCHQ86VS3 1027 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 HIPK1Q86Z02 1210 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 TIGD4Q8IY51 512 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ASB12Q8WXK4 309 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CEP295NLQ96MC4 621 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 MBOAT7Q96N66 472 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 CPXM1Q96SM3 734 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 LACRTQ9GZZ8 138 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 BRF2Q9HAW0 419 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 KCNK4Q9NYG8 393 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PLAGL2Q9UPG8 496 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 KCNK6Q9Y257 313 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 PCDHGA11Q9Y5H2 935 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 FAM237BA0A1B0GVD1 139 aa6.94□□□□□ -1.3
SPTA1-201ENST00000368147 ZNF726A6NNF4 738 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms