RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ITCHQ96J02 903 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 EIF3KQ9UBQ5 218 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 KIAA1024Q9UPX6 916 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LRRIQ1Q96JM4 1722 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PRAMEF33A0A0G2JMD5 474 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TLR5O60602 858 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PRAMEF10O60809 474 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FYNP06241 537 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DDOSTP39656 456 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 KDSRQ06136 332 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SEZ6Q53EL9 994 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 KCNRGQ8N5I3 272 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF366Q8N895 744 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 EEF1AKMT1Q8WVE0 214 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SEMA4DQ92854 862 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC16A4O15374 487 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 HOXC9P31274 260 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ALDH5A1P51649 535 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 HLFQ16534 295 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SV2AQ7L0J3 742 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 EMC7Q9NPA0 242 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ENTPD3O75355 529 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DGKAP23743 735 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LCN1P31025 176 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CRADDP78560 199 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ST3GAL4Q11206 333 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ACTRT3Q9BYD9 372 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC22A7Q9Y694 548 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GABRDO14764 452 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PRKCBP05771 671 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PITPNBP48739 271 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FOXO4P98177 505 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PARP15Q460N3 678 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SIAH1Q8IUQ4 282 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CA5BP1Q8WTZ4 195 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C16orf58Q96GQ5 468 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GCNAQ96QF7 691 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SYT15Q9BQS2 421 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 WIF1Q9Y5W5 379 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PRELPP51888 382 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NCALDP61601 193 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CNTN2Q02246 1040 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF517Q6ZMY9 492 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CDH26Q8IXH8 852 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ITPAQ9BY32 194 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NAALADL1Q9UQQ1 740 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ATP6V1B1P15313 513 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CBR1P16152 277 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SUCLG1P53597 346 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RPP30P78346 268 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MYBPC1Q00872 1141 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PDIA6Q15084 440 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 UFD1Q92890 307 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MTFMTQ96DP5 389 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PNMA5Q96PV4 448 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DPAGT1Q9H3H5 408 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SHROOM2Q13796 1616 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 H3BNH8 94 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 POLRMTO00411 1230 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ESR1P03372 595 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ACVR2AP27037 513 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NR0B1P51843 470 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM119Q4V9L6 283 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NOTUMQ6P988 496 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 RPLP0P6Q8NHW5 317 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NT5C1AQ9BXI3 368 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 EXOGQ9Y2C4 368 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 NPHP4O75161 1426 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TPH1P17752 444 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 GRIA4P48058 902 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 EIF3EP60228 445 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SLC18A2Q05940 514 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 CHAF1BQ13112 559 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 E2F2Q14209 437 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SWSAP1Q6NVH7 229 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DUS1LQ6P1R4 473 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 SNX20Q7Z614 316 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 COMMD2Q86X83 199 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PDSS2Q86YH6 399 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C18orf25Q96B23 403 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 HGH1Q9BTY7 390 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PDZD7Q9H5P4 517 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MUTYHQ9UIF7 546 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TCAF2A6NFQ2 919 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 PPP1R3GB7ZBB8 358 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ALG1L2C9J202 215 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MBP02144 154 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LTKP29376 864 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 FASTKD3Q14CZ7 662 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LINC01559Q495D7 138 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 ATG9BQ674R7 924 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LURAP1LQ8IV03 231 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM41AQ96HV5 264 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 TRNT1Q96Q11 434 aaKnown RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 DEFB129Q9H1M3 183 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 HSPBP1Q9NZL4 362 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 LAMP5Q9UJQ1 280 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 POLR2CP19387 275 aaPredicted RBP3.69□□□□□ -1.82
SYNE1-207ENST00000367255 MATKP42679 507 aa3.69□□□□□ -1.82
SYNE1-207ENST00000367255 C16orf86Q6ZW13 317 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms