RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CLEC10AQ8IUN9 316 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 EMC1Q8N766 993 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MAGEE2Q8TD90 523 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SLC5A11Q8WWX8 675 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 OVCA2Q8WZ82 227 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TBC1D24Q9ULP9 559 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 GPR34Q9UPC5 381 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ERGIC3Q9Y282 383 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ST14Q9Y5Y6 855 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 COL18A1P39060 1754 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 RECQL5O94762 991 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TCEA1P23193 301 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ENPEPQ07075 957 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CAMK2DQ13557 499 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FASTKQ14296 549 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 EIF4HQ15056 248 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MAPKAPK3Q16644 382 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ACAD10Q6JQN1 1059 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FAM171BQ6P995 826 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 STOX1Q6ZVD7 989 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SYT12Q8IV01 421 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 RNF148Q8N7C7 305 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 OR7G1Q8NGA0 311 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF75CPQ92670 426 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SYN2Q92777 582 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CPNE2Q96FN4 548 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FER1L6-AS2Q96M78 137 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FICDQ9BVA6 458 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TM6SF2Q9BZW4 377 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 UBE2ZQ9H832 354 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 THAP1Q9NVV9 213 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ZDHHC7Q9NXF8 308 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ACOT9Q9Y305 439 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 KLRC4-KLRK1H3BQV0 150 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 LDB2O43679 373 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MTHFD1P11586 935 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 IDH2P48735 452 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 PRKAA2P54646 552 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 OGFOD2Q6N063 350 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 APOBEC3HQ6NTF7 200 aaKnown RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SLC22A9Q8IVM8 553 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 FBXO25Q8TCJ0 367 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SLC2A14Q8TDB8 520 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 CPA5Q8WXQ8 436 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 MYLIPQ8WY64 445 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 LPPQ93052 612 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 BORCS6Q96GS4 357 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 TOX2Q96NM4 488 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 REEP2Q9BRK0 252 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 GPR174Q9BXC1 333 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 NTN4Q9HB63 628 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 SEMA3GQ9NS98 782 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF446Q9NWS9 450 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 IFT80Q9P2H3 777 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-206ENST00000367253 DKKL1Q9UK85 242 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 PACSIN3Q9UKS6 424 aa8.49□□□□□ -1.05
SYNE1-206ENST00000367253 ARL5CA6NH57 179 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GPR89AB7ZAQ6 455 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 B8ZZF3 427 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 BRINP1O60477 761 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SCAF4O95104 1147 aaKnown RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SOD2P04179 222 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GYPCP04921 128 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GPR89BP0CG08 455 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 HK1P19367 917 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 FUT4P22083 530 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GSTM5P46439 218 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 RBBP4Q09028 425 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 NR6A1Q15406 480 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 FGD3Q5JSP0 725 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 CXXC5Q7LFL8 322 aaKnown RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 FAM220AQ7Z4H9 259 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 RAVER1Q8IY67 606 aaKnown RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SLC37A3Q8NCC5 494 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 AKR7LQ8NHP1 331 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 FEZF2Q8TBJ5 459 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 BTN2A3PQ96KV6 586 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 C7orf50Q9BRJ6 194 aaKnown RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 FEM1AQ9BSK4 669 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SLC2A11Q9BYW1 496 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 ZDHHC5Q9C0B5 715 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GJB4Q9NTQ9 266 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 PIH1D1Q9NWS0 290 aaKnown RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 GTF2IRD1Q9UHL9 959 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SPO11Q9Y5K1 396 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 PKD1L3Q7Z443 1732 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 PGRMC2O15173 223 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 FARS2O95363 451 aaKnown RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 CCNE2O96020 404 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 PSKH1P11801 424 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 POU2F1P14859 743 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 DIO3P55073 304 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SIM1P81133 766 aaPredicted RBP8.48□□□□□ -1.05
SYNE1-206ENST00000367253 ARHGAP11BQ3KRB8 267 aa8.48□□□□□ -1.05
SYNE1-206ENST00000367253 SLCO6A1Q86UG4 719 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms