RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 GLB1L3Q8NCI6 653 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 OXSMQ9NWU1 459 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 IKZF3Q9UKT9 509 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 CDC123O75794 336 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 PRG2P13727 222 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 BDKRB1P46663 353 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 WDR4P57081 412 aaKnown RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 HERVK_113P63132 956 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 LIPEQ05469 1076 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 SCAPQ12770 1279 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 GHDCQ8N2G8 530 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 SLC13A3Q8WWT9 602 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 PRR11Q96HE9 360 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 LRIG1Q96JA1 1093 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 Q96MT0 163 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 TOX2Q96NM4 488 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 NECTIN4Q96NY8 510 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ERVK-6Q9BXR3 956 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ST13P50502 369 aaKnown RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 WDR5P61964 334 aaKnown RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 OLIG2Q13516 323 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 GFOD2Q3B7J2 385 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 GPRC6AQ5T6X5 926 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 KBTBD6Q86V97 674 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 RALGPS2Q86X27 583 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 NUDT13Q86X67 352 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 TSACCQ96A04 125 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 HHIPL1Q96JK4 782 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 TAC3Q9UHF0 121 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ADAM30Q9UKF2 790 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 REM1O75628 298 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 LATS1O95835 1130 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TOP3AQ13472 1001 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SLBPQ14493 270 aaKnown RBP eCLIP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 PRAMEF13Q5VWM6 474 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 GALNT18Q6P9A2 607 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 PGAM4Q8N0Y7 254 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 NXPE1Q8N323 547 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SFRP1Q8N474 314 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 FAM13CQ8NE31 585 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 RHBDD1Q8TEB9 315 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 THAP3Q8WTV1 239 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SLC26A3P40879 764 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 GSTM5P46439 218 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 CLDN10P78369 228 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TIMM50Q3ZCQ8 353 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 MSS51Q4VC12 460 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ERN2Q76MJ5 926 aaKnown RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 HPS6Q86YV9 775 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 CLVS1Q8IUQ0 354 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 IZUMO1Q8IYV9 350 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TTLQ8NG68 377 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 HCAR2Q8TDS4 363 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 GPR22Q99680 433 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SLITRK2Q9H156 845 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 PAIP2BQ9ULR5 123 aaKnown RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ELOVL7A1L3X0 281 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ADH1BP00325 375 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ITGB1P05556 798 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 JUNDP17535 347 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 RBMS1P29558 406 aaKnown RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 LARS2Q15031 903 aaKnown RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF761Q86XN6 746 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 RLN3Q8WXF3 142 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TGM7Q96PF1 710 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TMEM27Q9HBJ8 222 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 GSC2O15499 205 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SOCS5O75159 536 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 STX11O75558 287 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SCELO95171 688 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TGFB1P01137 390 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 CHRNGP07510 517 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 PTPN5P54829 565 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 NR1D2Q14995 579 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 ZBTB6Q15916 424 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 FITM2Q8N6M3 262 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 DDHD1Q8NEL9 900 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 MOSPD2Q8NHP6 518 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 RPLP0P6Q8NHW5 317 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 GPR151Q8TDV0 419 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 KCNJ9Q92806 393 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 GPR34Q9UPC5 381 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SH3GLB1Q9Y371 365 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 LRRC70Q7Z2Q7 622 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 SLC39A11Q8N1S5 342 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 NMD3Q96D46 503 aaKnown RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 HCSTQ9UBK5 93 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 CDH7Q9ULB5 785 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TTC34A8MYJ7 566 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 CDC7O00311 574 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 TIPRLO75663 272 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 UGT2B17O75795 530 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 RGS8P57771 180 aaPredicted RBP11.34□□□□□ -0.59
SYNE1-204ENST00000367248 DGCR6Q14129 220 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 MBOAT1Q6ZNC8 495 aa11.34□□□□□ -0.59
SYNE1-204ENST00000367248 FAM220AQ7Z4H9 259 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms