RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 CCDC38Q502W7 563 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 SEL1L2Q5TEA6 688 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 ARMC6Q6NXE6 501 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 PACS1Q6VY07 963 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 ATG14Q6ZNE5 492 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 PRUNE1Q86TP1 453 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 GLIS1Q8NBF1 620 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 OR52E1Q8NGJ3 308 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 APOBEC4Q8WW27 367 aaKnown RBP10.78□□□□□ -0.68
H3F3A-203ENST00000366815 LCN9Q8WX39 176 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 FERD3LQ96RJ6 166 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 RANBP9Q96S59 729 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 TUBB2BQ9BVA1 445 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 TSGA10Q9BZW7 698 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 SRMSQ9H3Y6 488 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 TFB2MQ9H5Q4 396 aaKnown RBP10.78□□□□□ -0.68
H3F3A-203ENST00000366815 MVB12BQ9H7P6 319 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 LATS2Q9NRM7 1088 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 C1GALT1Q9NS00 363 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 SMARCAL1Q9NZC9 954 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 KCND3Q9UK17 655 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 RIMKLBQ9ULI2 386 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 GUCA1BQ9UMX6 200 aa10.78□□□□□ -0.68
H3F3A-203ENST00000366815 HEATR9A2RTY3 570 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 SLC9B1P1A6NJY1 282 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 C21orf140B9A014 251 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 M0R082 166 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 MATN2O00339 956 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 IFRD1O00458 451 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 BTN3A3O00478 584 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 BTN3A1O00481 513 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 LIN7AO14910 233 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 KRT86O43790 486 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 CREG1O75629 220 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 SNRNP200O75643 2136 aaKnown RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 WISP1O95388 367 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 RECKO95980 971 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 IFNB1P01574 187 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 NTRK1P04629 796 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ETS1P14921 441 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ACADLP28330 430 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 FDFT1P37268 417 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ARL4DP49703 201 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ERV3-1Q14264 604 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 KRT33BQ14525 404 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 MEI1Q5TIA1 1274 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF517Q6ZMY9 492 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ADGRF3Q8IZF5 1079 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 SLC38A9Q8NBW4 561 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 OR8K5Q8NH50 307 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF417Q8TAU3 575 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 C1orf54Q8WWF1 131 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 TFGQ92734 400 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF778Q96MU6 729 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF587Q96SQ5 575 aaPredicted RBP10.77□□□□□ -0.69
H3F3A-203ENST00000366815 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 HGH1Q9BTY7 390 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 PITPNM3Q9BZ71 974 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 TRIM4Q9C037 500 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 TWSG1Q9GZX9 223 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 CASS4Q9NQ75 786 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 KCND1Q9NSA2 647 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 SLC2A6Q9UGQ3 507 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF148Q9UQR1 794 aa10.77□□□□□ -0.69
H3F3A-203ENST00000366815 SLC5A10A0PJK1 596 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 QSOX1O00391 747 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ARHGAP6O43182 974 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 CPNE3O75131 537 aaKnown RBP10.76□□□□□ -0.69
H3F3A-203ENST00000366815 KATNA1O75449 491 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 SCRG1O75711 98 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 GOT2P00505 430 aaKnown RBP10.76□□□□□ -0.69
H3F3A-203ENST00000366815 MSL3P1P0C860 447 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ST6GAL1P15907 406 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 CDH3P22223 829 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ADRA1DP25100 572 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 GSDMDP57764 484 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 PRKAA1Q13131 559 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 GPS2Q13227 327 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 PRKG2Q13237 762 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 SNX1Q13596 522 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF789Q5FWF6 425 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 TMTC4Q5T4D3 741 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 TSTD2Q5T7W7 516 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 FAM199XQ6PEV8 388 aaPredicted RBP10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ZNF534Q76KX8 674 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 TMEM135Q86UB9 458 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 PTRH1Q86Y79 214 aaKnown RBP10.76□□□□□ -0.69
H3F3A-203ENST00000366815 TMEM126BQ8IUX1 230 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 DNAAF3Q8N9W5 541 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 C9orf43Q8TAL5 461 aaPredicted RBP10.76□□□□□ -0.69
H3F3A-203ENST00000366815 HDAC10Q969S8 669 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 LRFN5Q96NI6 719 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 ALS2CR12Q96Q35 445 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 TLR10Q9BXR5 811 aa10.76□□□□□ -0.69
H3F3A-203ENST00000366815 GPR87Q9BY21 358 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms