RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CLCNKAP51800 687 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 ACLYP53396 1101 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SIRPAP78324 504 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 MRPS21P82921 87 aaKnown RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 ROR1Q01973 937 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 MEP1AQ16819 746 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TDRD12Q587J7 1177 aaKnown RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 C18orf63Q68DL7 685 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TMEM211Q6ICI0 200 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TPRG1Q6ZUI0 275 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TECPR1Q7Z6L1 1165 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SLFN11Q7Z7L1 901 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 CEP57Q86XR8 500 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 EMC1Q8N766 993 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TC2NQ8N9U0 490 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 RBM15BQ8NDT2 890 aaKnown RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 ACVR1CQ8NER5 493 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 Q8NFD4 153 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 WASF1Q92558 559 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 FRAT1Q92837 279 aaPredicted RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 CSF3RQ99062 836 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 GFI1Q99684 422 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SEMA3CQ99985 751 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SF3B5Q9BWJ5 86 aaKnown RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 GOLPH3LQ9H4A5 285 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 VCPKMTQ9H867 229 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 CHMP1AQ9HD42 196 aaPredicted RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 HIF1ANQ9NWT6 349 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 MCM9Q9NXL9 1143 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 FBXL2Q9UKC9 423 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 B3GALT5Q9Y2C3 310 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 LOXL2Q9Y4K0 774 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 DDX49Q9Y6V7 483 aaKnown RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 GRIN2DO15399 1336 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 UMODL1Q5DID0 1318 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 ZNF532Q9HCE3 1301 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SYNRGQ9UMZ2 1314 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 MYH2Q9UKX2 1941 aa5.46□□□□□ -1.53
RNU4-39P-201ENST00000362455 CACNA1FO60840 1977 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 LINC01553A4QN01 128 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 GOLGA6L9A6NEM1 432 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 ANKRD28O15084 1053 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 TADA2AO75478 443 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 CREG1O75629 220 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 EEF2P13639 858 aaKnown RBP5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 MYOGP15173 224 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 GJA1P17302 382 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF41P51814 821 aaPredicted RBP5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 CLDN20P56880 219 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 DHX34Q14147 1143 aaKnown RBP5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 PLCB4Q15147 1175 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 SNAPC1Q16533 368 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 SYT16Q17RD7 645 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 ATP13A5Q4VNC0 1218 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 KRBOX4Q5JUW0 171 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 TEX38Q6PEX7 206 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 BRAT1Q6PJG6 821 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 TMEM179Q6ZVK1 233 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 CAMKMTQ7Z624 323 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 FBXO39Q8N4B4 442 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC38A9Q8NBW4 561 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 CFAP61Q8NHU2 1237 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 TEKT4Q8WW24 435 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 HMCESQ96FZ2 354 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 ZNF778Q96MU6 729 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 IL1RAPL2Q9NP60 686 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 KLHL20Q9Y2M5 609 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 SNX9Q9Y5X1 595 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 ASTN1O14525 1302 aa5.46□□□□□ -1.54
RNU4-39P-201ENST00000362455 REV3LO60673 3130 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 PIEZO1Q92508 2521 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 ROBO3Q96MS0 1386 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 A0A0U1RQJ8 604 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 EPOPA6NHQ4 379 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 TMEM189-UBE2V1I3L0A0 370 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 J3QR06 171 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 WDR46O15213 610 aaKnown RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 DIAPH2O60879 1101 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 SLC25A27O95847 323 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 IGHV4-30-4P0DP06 118 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 NR2F2P24468 414 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 ARRB2P32121 409 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 MC5RP33032 325 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CDH13P55290 713 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 BEX3Q00994 111 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 BNC1Q01954 994 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 UBE2V1Q13404 147 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CAMK2DQ13557 499 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CCDC142Q17RM4 750 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CBWD6Q4V339 395 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 KRTCAP3Q53RY4 240 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CBWD3Q5JTY5 395 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 EFHC1Q5JVL4 640 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 C12orf60Q5U649 245 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 C8orf82Q6P1X6 216 aaPredicted RBP5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 FAM47EQ6ZV65 393 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 CHST3Q7LGC8 479 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 GPR180Q86V85 440 aa5.45□□□□□ -1.54
RNU4-39P-201ENST00000362455 FJX1Q86VR8 437 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms