RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 CDH13P55290 713 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 PKNOX1P55347 436 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 KRT33BQ14525 404 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 CLCA4Q14CN2 919 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 ELOCQ15369 112 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 RPE65Q16518 533 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 CGB2Q6NT52 195 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 SLC30A9Q6PML9 568 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 CEP68Q76N32 757 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 CUZD1Q86UP6 607 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 ZNF781Q8N8C0 355 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 OR5AR1Q8NGP9 310 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 TRPC4APQ8TEL6 797 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 ESAMQ96AP7 390 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 ERVMER34-1Q9H9K5 563 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 ACSS2Q9NR19 701 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 KLF15Q9UIH9 416 aa17.54■□□□□ 0.4
CCDC7-203ENST00000362006 SLC16A8O95907 504 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 FGF4P08620 206 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 MTHFD1P11586 935 aaKnown RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 F3P13726 295 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 C18orf21Q32NC0 220 aaPredicted RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 PTCHD3Q3KNS1 767 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 CCSMST1Q4G0I0 132 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 FBXO48Q5FWF7 155 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 ATG14Q6ZNE5 492 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 GOLGA7Q7Z5G4 137 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 CHCHD4Q8N4Q1 142 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 TEX9Q8N6V9 391 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 NSUN5Q96P11 429 aaKnown RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 ZNF382Q96SR6 550 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 RAB11FIP5Q9BXF6 653 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 NPHS2Q9NP85 383 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 SEMA4BQ9NPR2 832 aaPredicted RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 IMP3Q9NV31 184 aaKnown RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 OTCP00480 354 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 CCND1P24385 295 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 IMPA1P29218 277 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 CCR10P46092 362 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 CSNK1EP49674 416 aaKnown RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 NUBP1P53384 320 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 HNRNPKP61978 463 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 RBBP7Q16576 425 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 TAF8Q7Z7C8 310 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 OR56A3Q8NH54 315 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 CCL4L1Q8NHW4 92 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 PLCD4Q9BRC7 762 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 ZBTB26Q9HCK0 441 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 MID1IP1Q9NPA3 183 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 DNAJC11Q9NVH1 559 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 PNPOQ9NVS9 261 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 SPASTQ9UBP0 616 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 ZDHHC2Q9UIJ5 367 aa17.53■□□□□ 0.4
CCDC7-203ENST00000362006 TDRKHQ9Y2W6 561 aaKnown RBP17.53■□□□□ 0.4
CCDC7-203ENST00000362006 SPAG17Q6Q759 2223 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 A6NCN8 305 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ESRRBO95718 433 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 SP9P0CG40 484 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 MPSTP25325 297 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 HOXD12P35452 270 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 SRSF5Q13243 272 aaKnown RBP17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ZNF542PQ5EBM4 170 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 SH2D4BQ5SQS7 431 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 RPS27LQ71UM5 84 aaKnown RBP17.52■□□□□ 0.4
CCDC7-203ENST00000362006 RABEPKQ7Z6M1 372 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 SYTL1Q8IYJ3 562 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 CLYBLQ8N0X4 340 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ANKS4BQ8N8V4 417 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ZBTB44Q8NCP5 570 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 AGAP11Q8TF27 550 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ZNF480Q8WV37 535 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ATP6V1E2Q96A05 226 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 MAGEB10Q96LZ2 347 aaPredicted RBP17.52■□□□□ 0.4
CCDC7-203ENST00000362006 CAMK1GQ96NX5 476 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 TCEAL2Q9H3H9 227 aaPredicted RBP17.52■□□□□ 0.4
CCDC7-203ENST00000362006 IPPKQ9H8X2 491 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 KCNK4Q9NYG8 393 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 TAAR2Q9P1P5 351 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 ASB1Q9Y576 335 aa17.52■□□□□ 0.4
CCDC7-203ENST00000362006 CFAP20Q9Y6A4 193 aaKnown RBP17.52■□□□□ 0.4
CCDC7-203ENST00000362006 FANCMQ8IYD8 2048 aa17.52■□□□□ 0.39
CCDC7-203ENST00000362006 TNRC6BQ9UPQ9 1833 aaKnown RBP17.52■□□□□ 0.39
CCDC7-203ENST00000362006 GPR37L1O60883 481 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 WDR47O94967 919 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 KITP10721 976 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 GDF5P43026 501 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 PNLIPRP1P54315 467 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 SH3BP2P78314 561 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 NAE1Q13564 534 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 GRB7Q14451 532 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 PRRT3Q5FWE3 981 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 CAPN13Q6MZZ7 669 aaPredicted RBP17.51■□□□□ 0.39
CCDC7-203ENST00000362006 LAYNQ6UX15 382 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 GPRIN3Q6ZVF9 776 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 GKN2Q86XP6 184 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 CACNA2D3Q8IZS8 1091 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 CCDC197Q8NCU1 140 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 NTMT1Q9BV86 223 aa17.51■□□□□ 0.39
CCDC7-203ENST00000362006 ATG10Q9H0Y0 220 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms