RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ENGP17813 658 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 EPHB3P54753 998 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 OLR1P78380 273 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 LCN8Q6JVE9 175 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ANKRD26P1Q6NSI1 321 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 CERS6Q6ZMG9 384 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 DTWD1Q8N5C7 304 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 C11orf65Q8NCR3 313 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 CDK5RAP1Q96SZ6 601 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 SLC30A3Q99726 388 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 SERHL2Q9H4I8 314 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 TRPV5Q9NQA5 729 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 SERHLQ9NQF3 203 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 TMLHEQ9NVH6 421 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 AIG1Q9NVV5 245 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ENOPH1Q9UHY7 261 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 CLEC4AQ9UMR7 237 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 GSTK1Q9Y2Q3 226 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 H0YJX3 145 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 MT-ND2P03891 347 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 RPLP0P05388 317 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 HTR7P34969 479 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 RAB25P57735 213 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 CYP4V2Q6ZWL3 525 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ZZZ3Q8IYH5 903 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 SCML4Q8N228 414 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 IMP4Q96G21 291 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 TMEM106CQ9BVX2 250 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 MAGEH1Q9H213 219 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 DNAJC11Q9NVH1 559 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 FAM118AQ9NWS6 357 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 TCRBV3S1A0A5B6 114 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 A8MU76 341 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 SAP18O00422 153 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 HSD17B1P14061 328 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 PAICSP22234 425 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 DSC3Q14574 896 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 RNASE12Q5GAN4 147 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 GLB1L3Q8NCI6 653 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 BTN2A2Q8WVV5 523 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 IL12RB2Q99665 862 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 DERL2Q9GZP9 239 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 SMOC2Q9H3U7 446 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 MIOSQ9NXC5 875 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 CLCA2Q9UQC9 943 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 BCAS1O75363 584 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 GPX3P22352 226 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 CDKN1CP49918 316 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 OR2B6P58173 313 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 ARPC4P59998 168 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 UAP1L1Q3KQV9 507 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 DCDC5Q6ZRR9 648 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 LARP4Q71RC2 724 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 CDH24Q86UP0 819 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 IGFN1Q86VF2 1251 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 TRUB1Q8WWH5 349 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 IGSF8Q969P0 613 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 ARMC1Q9NVT9 282 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 SLC9A8Q9Y2E8 581 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 ERAL1O75616 437 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 SNAI1O95863 264 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 POLR2IP36954 125 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 GHRHRQ02643 423 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 TRIM40Q6P9F5 258 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 C7orf57Q8NEG2 295 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 HDAC2Q92769 488 aaKnown RBP13.61□□□□□ -0.23
COL6A1-201ENST00000361866 PPCDCQ96CD2 204 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 LGALS12Q96DT0 336 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 SMIM14Q96QK8 99 aa13.61□□□□□ -0.23
COL6A1-201ENST00000361866 ANKRD66B4E2M5 251 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 CASKO14936 926 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PDE9AO76083 593 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 NR2F6P10588 404 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ITGA2P17301 1181 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 COX10Q12887 443 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PLEKHG6Q3KR16 790 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PSAPL1Q6NUJ1 521 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 KRT74Q7RTS7 529 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 VN1R5Q7Z5H4 357 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 CARM1Q86X55 608 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 SLC7A5P1Q8MH63 180 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 SDR39U1Q9NRG7 319 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 SLC22A14Q9Y267 594 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 HAT1O14929 419 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 AXIN1O15169 862 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ERN1O75460 977 aaKnown RBP13.6□□□□□ -0.23
COL6A1-201ENST00000361866 GBAP04062 536 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 URODP06132 367 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 DNAJB1P25685 340 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 EMX2Q04743 252 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 ABRAXAS2Q15018 415 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 PLA2G4EQ3MJ16 856 aa13.6□□□□□ -0.23
COL6A1-201ENST00000361866 THOC7Q6I9Y2 204 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms