RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PLEKHS1Q5SXH7 462 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 TRPV3Q8NET8 790 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 EBF3Q9H4W6 596 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 RIIAD1A6NNX1 92 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 MAN2B1O00754 1011 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 ALOX12P18054 663 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 BMPR1AP36894 532 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 TM4SF4P48230 202 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 GATMP50440 423 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 FOXM1Q08050 763 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 PAOXQ6QHF9 649 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 ZHX1-C8orf76Q96EF9 292 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 MTERF1Q99551 399 aaKnown RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 ZNF624Q9P2J8 865 aaPredicted RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 B4GALT6Q9UBX8 382 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 OGDHLQ9ULD0 1010 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 TLX3O43711 291 aaPredicted RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 CNMDO75829 334 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 PGLSO95336 258 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 CLDN10P78369 228 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 SLC9B2Q86UD5 537 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 CILP2Q8IUL8 1156 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 IZUMO1Q8IYV9 350 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 OXR1Q8N573 874 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 RFKQ969G6 155 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 CYP2S1Q96SQ9 504 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 C12orf65Q9H3J6 166 aaKnown RBP13.2□□□□□ -0.3
LDB3-202ENST00000361373 SPATA7Q9P0W8 599 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 DAPK2Q9UIK4 370 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 PHF11Q9UIL8 331 aa13.2□□□□□ -0.3
LDB3-202ENST00000361373 STX16-NPEPL1H3BU86 382 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 STX16O14662 325 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 MMP20O60882 483 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 VEGFBP49765 207 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PSMD7P51665 324 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 MYBPC1Q00872 1141 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CYP4F3Q08477 520 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 RALGDSQ12967 914 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 THAP5Q7Z6K1 395 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 SMARCD2Q92925 531 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 NSMCE3Q96MG7 304 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 EBPLQ9BY08 206 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 LRRC3Q9BY71 257 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CIDEBQ9UHD4 219 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 TSPAN6O43657 245 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PRKCGP05129 697 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 GIMD1P0DJR0 217 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 EEFSECP57772 596 aaKnown RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 FBXO48Q5FWF7 155 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 GPRC6AQ5T6X5 926 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 ART5Q96L15 291 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PTPN18Q99952 460 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 DPYSL5Q9BPU6 564 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 FEM1AQ9BSK4 669 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CDADC1Q9BWV3 514 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 AGPSO00116 658 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 NBNO60934 754 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 GSTM4Q03013 218 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 TRAP1Q12931 704 aaKnown RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 REXO4Q9GZR2 422 aaKnown RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 EPB41L1Q9H4G0 881 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PHF24Q9UPV7 400 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PCDHB11Q9Y5F2 797 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CXCR6O00574 342 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 EBLN1P0CF75 366 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 THRBP10828 461 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 SNAPC1Q16533 368 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 ZZZ3Q8IYH5 903 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CADM2Q8N3J6 435 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 SIGLEC10Q96LC7 697 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PEBP4Q96S96 227 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 TOR4AQ9NXH8 423 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 RAB26Q9ULW5 256 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 PCDHGA2Q9Y5H1 932 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 DCLK1O15075 740 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 GRID2O43424 1007 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 NRG3P56975 720 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 CHCHD4Q8N4Q1 142 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 OR10A6Q8NH74 314 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 ESAMQ96AP7 390 aa13.19□□□□□ -0.3
LDB3-202ENST00000361373 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
LDB3-202ENST00000361373 M0QZQ0 153 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 MAGEB3O15480 346 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 CCNB2O95067 398 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 IL7RP16871 459 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 SLC18A2Q05940 514 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 RTL10Q7L3V2 364 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 PIGWQ7Z7B1 504 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms