RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 XKR7Q5GH72 579 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 LIPJQ5W064 366 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
CCDC197-201ENST00000359253 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 Q6ZS52 159 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 DDIASQ8IXT1 998 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 MAML2Q8IZL2 1156 aaPredicted RBP13.15□□□□□ -0.3
CCDC197-201ENST00000359253 L3MBTL4Q8NA19 623 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 OR4F6Q8NGB9 312 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 FOXJ1Q92949 421 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 SCARF2Q96GP6 870 aaPredicted RBP13.15□□□□□ -0.3
CCDC197-201ENST00000359253 RTKNQ9BST9 563 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 APOOQ9BUR5 198 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 TNFRSF12AQ9NP84 129 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 MBNL1Q9NR56 388 aaKnown RBP13.15□□□□□ -0.3
CCDC197-201ENST00000359253 GPRC5BQ9NZH0 403 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
CCDC197-201ENST00000359253 GULP1Q9UBP9 304 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 EBF1Q9UH73 591 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF225Q9UK10 706 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 ARHGEF33A8MVX0 844 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 IFRD1O00458 451 aaPredicted RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 APBB3O95704 486 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 KRT6AP02538 564 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 KRT6BP04259 564 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 JUNP05412 331 aaKnown RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 CAPN1P07384 714 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PRR35P0CG20 571 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 COX4I1P13073 169 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 IDO1P14902 403 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 GABRG2P18507 467 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 HNRNPA2B1P22626 353 aaKnown RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PIK3R1P27986 724 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 ACADLP28330 430 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 CNR2P34972 360 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 KRT6CP48668 564 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 TPMTP51580 245 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 CCR5P51681 352 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 STX5Q13190 355 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 MAD2L1Q13257 205 aaPredicted RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 CYLC2Q14093 348 aaPredicted RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 ARHGAP19Q14CB8 494 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PTCHD3Q3KNS1 767 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 C10orf62Q5T681 223 aaPredicted RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PDZD3Q86UT5 571 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 TRIM74Q86UV6 250 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 CACUL1Q86Y37 369 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 OR52B6Q8NGF0 335 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 OR9A1PQ8NGU1 263 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 OR56A3Q8NH54 315 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 SETD7Q8WTS6 366 aaKnown RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 ESAMQ96AP7 390 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 TUBGCP3Q96CW5 907 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
CCDC197-201ENST00000359253 PPP3R2Q96LZ3 170 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 TBC1D10AQ9BXI6 508 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 OR52A5Q9H2C5 316 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 AKTIPQ9H8T0 292 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 TAS2R1Q9NYW7 299 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 SNX6Q9UNH7 406 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 DMTF1Q9Y222 760 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 TMEM98Q9Y2Y6 226 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 ASB1Q9Y576 335 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
CCDC197-201ENST00000359253 C10orf142B7Z368 130 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 K7ESF4 209 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 TNFRSF10CO14798 259 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 GSC2O15499 205 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 RGS14O43566 566 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ZNF217O75362 1048 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ULK1O75385 1050 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 SP9P0CG40 484 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 HTR1BP28222 390 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 PDHA2P29803 388 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 PBLDP30039 288 aaPredicted RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 PRDX3P30048 256 aaKnown RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 AKT2P31751 481 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 IGFALSP35858 605 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ARL1P40616 181 aaPredicted RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 PREPP48147 710 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 FOXA1P55317 472 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 CTBSQ01459 385 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 CSTF1Q05048 431 aaKnown RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 CAPN13Q6MZZ7 669 aaPredicted RBP13.13□□□□□ -0.31
CCDC197-201ENST00000359253 LETMD1Q6P1Q0 360 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 AGTRAPQ6RW13 159 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 TRIM46Q7Z4K8 759 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 CDYL2Q8N8U2 506 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 SNX31Q8N9S9 440 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 CFAP61Q8NHU2 1237 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 MCUR1Q96AQ8 359 aa13.13□□□□□ -0.31
CCDC197-201ENST00000359253 ERLEC1Q96DZ1 483 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms