RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ESX1Q8N693 406 aa12.36□□□□□ -0.43
GGPS1-202ENST00000358966 ATP6V1E2Q96A05 226 aa12.36□□□□□ -0.43
GGPS1-202ENST00000358966 CMTM5Q96DZ9 223 aa12.36□□□□□ -0.43
GGPS1-202ENST00000358966 CDCA3Q99618 268 aaPredicted RBP12.36□□□□□ -0.43
GGPS1-202ENST00000358966 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
GGPS1-202ENST00000358966 PDE10AQ9Y233 779 aa12.36□□□□□ -0.43
GGPS1-202ENST00000358966 ANKRD34BA5PLL1 514 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 WNT9AO14904 365 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GPC4O75487 556 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 CAPN1P07384 714 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ENO3P13929 434 aaPredicted RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GALNT1Q10472 559 aaPredicted RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ABRQ12979 859 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GTF2H2Q13888 395 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GTF2H2CQ6P1K8 395 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 TDHQ8IZJ6 230 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 METTL25Q8N6Q8 603 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 FAM156AQ8NDB6 213 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 OR4F6Q8NGB9 312 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GLYATL1Q969I3 302 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 RHBDF1Q96CC6 855 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 PANX3Q96QZ0 392 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 TUBB6Q9BUF5 446 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 TRMT61BQ9BVS5 477 aaKnown RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 TRIM8Q9BZR9 551 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ATG10Q9H0Y0 220 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 RBM38Q9H0Z9 239 aaKnown RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ARL15Q9NXU5 204 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 SORCS3Q9UPU3 1222 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ARNTLO00327 626 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 STX16O14662 325 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 RAD51BO15315 384 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 HGFP14210 728 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ENPP1P22413 925 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ITGB7P26010 798 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ENTPD1P49961 510 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 HK2P52789 917 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 YBX1P67809 324 aaKnown RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 TBCCQ15814 346 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 SGO1Q5FBB7 561 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 LYPLAL1Q5VWZ2 237 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 DOK6Q6PKX4 331 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 ISLR2Q6UXK2 745 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GPRIN3Q6ZVF9 776 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 AADATQ8N5Z0 425 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 BTN2A2Q8WVV5 523 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 MTFMTQ96DP5 389 aaKnown RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 PDLIM5Q96HC4 596 aaKnown RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 TEX37Q96LM6 180 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 PRPF18Q99633 342 aaKnown RBP12.35□□□□□ -0.43
GGPS1-202ENST00000358966 NRTNQ99748 197 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 P2RY13Q9BPV8 354 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 OR2AG1Q9H205 316 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 PLGRKTQ9HBL7 147 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 KCTD5Q9NXV2 234 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 NUDT4Q9NZJ9 180 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 GULP1Q9UBP9 304 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 OARD1Q9Y530 152 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 STON1Q9Y6Q2 735 aa12.35□□□□□ -0.43
GGPS1-202ENST00000358966 LOC105371267A0A1B0GV96 52 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 AREL1O15033 823 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 LZTS3O60299 673 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 HNRNPCL1O60812 293 aaKnown RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 PAPLNO95428 1278 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 ESRRBO95718 433 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 FUCA1P04066 466 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 SMIM18P0DKX4 95 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 PIM1P11309 404 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 ANPEPP15144 967 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 VCLP18206 1134 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TCN1P20061 433 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 IGFBP4P22692 258 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TCEA1P23193 301 aaKnown RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 DRD3P35462 400 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 RPIAP49247 311 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TUBA1BP68363 451 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TMEM115Q12893 351 aaPredicted RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 ADGRE1Q14246 886 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 FASTKQ14296 549 aaKnown RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 CRTC3Q6UUV7 619 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TMEM184AQ6ZMB5 413 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 GOLM1Q8NBJ4 401 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 DTD2Q96FN9 168 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 GRIP2Q9C0E4 1043 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 CD93Q9NPY3 652 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 CNOT6Q9ULM6 557 aaKnown RBP12.34□□□□□ -0.43
GGPS1-202ENST00000358966 SCAMP1O15126 338 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 TM7SF2O76062 418 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 BAG2O95816 211 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 CLPTM1O96005 669 aa12.34□□□□□ -0.43
GGPS1-202ENST00000358966 OCM2P0CE71 109 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms