RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SYNDIG1LA6NDD5 238 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MYADML2A6NDP7 307 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 M0R129 80 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 SLC28A1O00337 649 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 SLC22A1O15245 554 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ANXA5P08758 320 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 DGKAP23743 735 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ATP5C1P36542 298 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TAF1AQ15573 450 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 VARS2Q5ST30 1063 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TRAF7Q6Q0C0 670 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 Q6ZPB1 254 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF605Q86T29 641 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 COLGALT2Q8IYK4 626 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MDGA1Q8NFP4 955 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 UBASH3BQ8TF42 649 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 GTF3C2Q8WUA4 911 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF583Q96ND8 569 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ALPK1Q96QP1 1244 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MTERF1Q99551 399 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 INPP5KQ9BT40 448 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 EHD1Q9H4M9 534 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 IKZF5Q9H5V7 419 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 PAK1IP1Q9NWT1 392 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 NUDT4Q9NZJ9 180 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 RAPGEFL1Q9UHV5 662 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ARIH1Q9Y4X5 557 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 PCDHGA4Q9Y5G9 962 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TRIP12Q14669 1992 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 FPGTO14772 594 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 IDH3BO43837 385 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 UGT2B11O75310 529 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 STK16O75716 305 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CELF2O95319 508 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 DNTTP04053 509 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 FABP3P05413 133 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MMP2P08253 660 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 RPS17P08708 135 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 INPP1P49441 399 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 HK3P52790 923 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 YBEYP58557 167 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 NFKB2Q00653 900 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CSTF3Q12996 717 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MAP2K5Q13163 448 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CLCA4Q14CN2 919 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 SF1Q15637 639 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 RFX4Q33E94 735 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TPGS1Q6ZTW0 290 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ANKRD13BQ86YJ7 626 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 DCP2Q8IU60 420 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ARMC8Q8IUR7 673 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CADM3Q8N126 398 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 RNF175Q8N4F7 328 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ZBED2Q9BTP6 218 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TRIM39Q9HCM9 518 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ENPP5Q9UJA9 477 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 PCDHB14Q9Y5E9 798 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TCRBV5S2A0A599 114 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 SMIM30A4D0T7 59 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 KRT87PA6NCN2 255 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MGAT4DA6NG13 374 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MROH6A6NGR9 719 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ANKRD66B4E2M5 251 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 IFRD1O00458 451 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 PRAMEF11O60813 436 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MTX2O75431 263 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 SEC14L2O76054 403 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 C7P10643 843 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 BMP4P12644 408 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TNFRSF1BP20333 461 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 GJA8P48165 433 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 IRF8Q02556 426 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MXD1Q05195 221 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 INO80DQ53TQ3 878 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 OR2T5Q6IEZ7 315 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 SCAIQ8N9R8 606 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 OR2T29Q8NH02 315 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 GTPBP3Q969Y2 492 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 OTULINQ96BN8 352 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 PYURFQ96I23 114 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF382Q96SR6 550 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 MCMBPQ9BTE3 642 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 TNKS2Q9H2K2 1166 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CARS2Q9HA77 564 aaKnown RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 NTN4Q9HB63 628 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ARNT2Q9HBZ2 717 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 ZBTB20Q9HC78 741 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 AASDHPPTQ9NRN7 309 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 GIMAP4Q9NUV9 329 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 NLE1Q9NVX2 485 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 C14orf119Q9NWQ9 140 aa6.43□□□□□ -1.38
CSDE1-203ENST00000358528 CAB39Q9Y376 341 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-203ENST00000358528 STX16O14662 325 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TBL1XO60907 577 aa6.42□□□□□ -1.38
CSDE1-203ENST00000358528 XPAP23025 273 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 TCEA1P23193 301 aaKnown RBP6.42□□□□□ -1.38
CSDE1-203ENST00000358528 CORO1AP31146 461 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms