RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 CIR1Q86X95 450 aaPredicted RBP23.2■■□□□ 1.3
NPAS3-203ENST00000357798 LIX1Q8N485 282 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 POC5Q8NA72 575 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 PDLIM5Q96HC4 596 aaKnown RBP23.2■■□□□ 1.3
NPAS3-203ENST00000357798 OR52E6Q96RD3 313 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 MGME1Q9BQP7 344 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 IPPKQ9H8X2 491 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 TM9SF3Q9HD45 589 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 TMEM98Q9Y2Y6 226 aa23.2■■□□□ 1.3
NPAS3-203ENST00000357798 E5RI56 91 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 KCNK2O95069 426 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 CDCA5Q96FF9 252 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 CEP295NLQ96MC4 621 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 BARD1Q99728 777 aaKnown RBP23.19■■□□□ 1.3
NPAS3-203ENST00000357798 AREL1O15033 823 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 PAX3P23760 479 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 OR1E1P30953 314 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 GJA5P36382 358 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 LRIF1Q5T3J3 769 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 STEAP3Q658P3 488 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 OR2T5Q6IEZ7 315 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 GPR142Q7Z601 462 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 TSPYL5Q86VY4 417 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-203ENST00000357798 TTC29Q8NA56 475 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-203ENST00000357798 OR2T29Q8NH02 315 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 HASPINQ8TF76 798 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 FCGR1BQ92637 280 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 RMDN1Q96DB5 314 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 RPRD1AQ96P16 312 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-203ENST00000357798 RHNO1Q9BSD3 238 aa23.19■■□□□ 1.3
NPAS3-203ENST00000357798 PNMA8BQ9ULN7 279 aaPredicted RBP23.19■■□□□ 1.3
NPAS3-203ENST00000357798 RGS13O14921 159 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 DYRK3O43781 588 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 IFITM2Q01629 132 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 CEP68Q76N32 757 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 ITPAQ9BY32 194 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 SAMD4AQ9UPU9 718 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 TBX1O43435 398 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 DLGAP3O95886 979 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 LPOP22079 712 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 MC4RP32245 332 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 KRT20P35900 424 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 TGFBR1P36897 503 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 PPP3CCP48454 512 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 CLK1P49759 484 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 EFEMP1Q12805 493 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 COLEC12Q5KU26 742 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 MMAAQ8IVH4 418 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 ZNF486Q96H40 463 aaPredicted RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 ADARB2Q9NS39 739 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 ZMYM5Q9UJ78 669 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 MAN2B2Q9Y2E5 1009 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 A0A096LPI6 279 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 A8MU76 341 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 PSMD11O00231 422 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 WNT9AO14904 365 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 PER2O15055 1255 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 ESR1P03372 595 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 MRPS6P82932 125 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 IL1RL1Q01638 556 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 SMN1Q16637 294 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 PYCR2Q96C36 320 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 KCNH6Q9H252 994 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 SARS2Q9NP81 518 aaKnown RBP23.18■■□□□ 1.3
NPAS3-203ENST00000357798 FKBPLQ9UIM3 349 aa23.18■■□□□ 1.3
NPAS3-203ENST00000357798 GREB1Q4ZG55 1949 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 ARVCFO00192 962 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 GPR182O15218 404 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 WDR47O94967 919 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 LCKP06239 509 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 FPR1P21462 350 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 GNPDA1P46926 289 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 ABHD18Q0P651 414 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 PNCKQ6P2M8 343 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 SBSNQ6UWP8 590 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 MRPL10Q7Z7H8 261 aaKnown RBP23.17■■□□□ 1.3
NPAS3-203ENST00000357798 KRTCAP2Q8N6L1 136 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 PARVBQ9HBI1 364 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 SLC6A13Q9NSD5 602 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 ARIH1Q9Y4X5 557 aaPredicted RBP23.17■■□□□ 1.3
NPAS3-203ENST00000357798 TDRD15B5MCY1 1934 aaKnown RBP23.17■■□□□ 1.3
NPAS3-203ENST00000357798 TCEA1P23193 301 aaKnown RBP23.17■■□□□ 1.3
NPAS3-203ENST00000357798 HOXC8P31273 242 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 DNAJA1P31689 397 aaKnown RBP23.17■■□□□ 1.3
NPAS3-203ENST00000357798 CASP3P42574 277 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 CLCN7P51798 805 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 PROX2Q3B8N5 592 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 TMEM132CQ8N3T6 1108 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 NPLOC4Q8TAT6 608 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 PROX1Q92786 737 aa23.17■■□□□ 1.3
NPAS3-203ENST00000357798 M0QZ92 97 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 RAD51BO15315 384 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 SEC22BO75396 215 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 TYMPP19971 482 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 CSNK2BP67870 215 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 GTF2H3Q13889 308 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 SLX4IPQ5VYV7 408 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 C10orf111Q8N326 155 aa23.16■■□□□ 1.3
NPAS3-203ENST00000357798 PITX2Q99697 317 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms