RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 MACC1Q6ZN28 852 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 BNC2Q6ZN30 1099 aaPredicted RBP13.52□□□□□ -0.24
LSS-201ENST00000356396 C11orf96Q7Z7L8 435 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 ADGRG6Q86SQ4 1221 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 LIX1Q8N485 282 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 CXorf40AQ8TE69 158 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 PATE1Q8WXA2 126 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 HIST1H2AHQ96KK5 128 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 HIST1H2AJQ99878 128 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 H2AFJQ9BTM1 129 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 IKZF5Q9H5V7 419 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 VTI1BQ9UEU0 232 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.24
LSS-201ENST00000356396 H3BM21 787 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 TGFB1P01137 390 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 ABCB1P08183 1280 aaPredicted RBP13.52□□□□□ -0.25
LSS-201ENST00000356396 UBTFL6P0CB48 400 aaPredicted RBP13.52□□□□□ -0.25
LSS-201ENST00000356396 CYP2A6P11509 494 aaPredicted RBP13.52□□□□□ -0.25
LSS-201ENST00000356396 LBPP18428 481 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 MUM1Q2TAK8 710 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 FAM174BQ3ZCQ3 159 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 ATP6AP1LQ52LC2 224 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 PIP5KL1Q5T9C9 394 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 FBXW8Q8N3Y1 598 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 RPLP0P6Q8NHW5 317 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 PROKR1Q8TCW9 393 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 DTD2Q96FN9 168 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 FCRL4Q96PJ5 515 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 TUBGCP5Q96RT8 1024 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 LYSMD1Q96S90 227 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 PKP4Q99569 1192 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 SEPHS2Q99611 448 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 ACPTQ9BZG2 426 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 IMP3Q9NV31 184 aaKnown RBP13.52□□□□□ -0.25
LSS-201ENST00000356396 KCTD5Q9NXV2 234 aa13.52□□□□□ -0.25
LSS-201ENST00000356396 URB1O60287 2271 aaKnown RBP13.51□□□□□ -0.25
LSS-201ENST00000356396 SOX1O00570 391 aaPredicted RBP13.51□□□□□ -0.25
LSS-201ENST00000356396 H2AFYO75367 372 aaKnown RBP13.51□□□□□ -0.25
LSS-201ENST00000356396 ANXA5P08758 320 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 ANPEPP15144 967 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 TRIP10Q15642 601 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 KIAA0907Q7Z7F0 614 aaPredicted RBP13.51□□□□□ -0.25
LSS-201ENST00000356396 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 TSACCQ96A04 125 aaPredicted RBP13.51□□□□□ -0.25
LSS-201ENST00000356396 TRAPPC9Q96Q05 1148 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 CEP44Q9C0F1 390 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 MARK1Q9P0L2 795 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 PNMA8BQ9ULN7 279 aaPredicted RBP13.51□□□□□ -0.25
LSS-201ENST00000356396 PIAS3Q9Y6X2 628 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 NINQ8N4C6 2090 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 NME4O00746 187 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 PRAMEF10O60809 474 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 ULK1O75385 1050 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 PRNPP04156 253 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 MAOBP27338 520 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 CSNK1DP48730 415 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 GPR33Q49SQ1 333 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 LILRA2Q8N149 483 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 IL17RCQ8NAC3 791 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 ICA1LQ8NDH6 482 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 ASB11Q8WXH4 323 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 OR51B5Q9H339 312 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 EFCAB1Q9HAE3 211 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 OARD1Q9Y530 152 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 CACNA1EQ15878 2313 aa13.51□□□□□ -0.25
LSS-201ENST00000356396 A0A1W2PQU0 124 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 K7EPI3 171 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 ANGPT2O15123 496 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 EML2O95834 649 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 ZCCHC18P0CG32 403 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 PFN3P60673 137 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 ACTR3P61158 418 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 NFYCQ13952 458 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 ITPRIPL2Q3MIP1 535 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 AGBL4Q5VU57 503 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 IZUMO2Q6UXV1 221 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 UCN3Q969E3 161 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 STN1Q9H668 368 aaKnown RBP13.5□□□□□ -0.25
LSS-201ENST00000356396 RIMKLBQ9ULI2 386 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 VPS9D1Q9Y2B5 631 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 EDDM13A0A1B0GTR0 161 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 AREL1O15033 823 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 DFNA5O60443 496 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 TIPRLO75663 272 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 HOXB2P14652 356 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 CLCNKAP51800 687 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 ADARP55265 1226 aaKnown RBP13.5□□□□□ -0.25
LSS-201ENST00000356396 MC1RQ01726 317 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 IRF8Q02556 426 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 AGTRAPQ6RW13 159 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 LRRC74BQ6ZQY2 392 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 DPPA4Q7L190 304 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 ADCK2Q7Z695 626 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 GALNT7Q86SF2 657 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 HMGN2P46Q86SG4 172 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
LSS-201ENST00000356396 RP9Q8TA86 221 aaKnown RBP13.5□□□□□ -0.25
LSS-201ENST00000356396 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms