RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 A8MU76 341 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CAPN5O15484 640 aaPredicted RBP17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 C8GP07360 202 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 NUDT17P0C025 328 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 SPINK2P20155 84 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CNTFP26441 200 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CCNFP41002 786 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CSRP3P50461 194 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 TSNQ15631 228 aaKnown RBP17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CDCP2Q5VXM1 449 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 FAM92BQ6ZTR7 304 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 RAB44Q7Z6P3 723 aaPredicted RBP17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 ADGRF3Q8IZF5 1079 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CYP4X1Q8N118 509 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 LINC01555Q8NAE3 123 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 RCBTB1Q8NDN9 531 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 OR9A1PQ8NGU1 263 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 KCTD4Q8WVF5 259 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 PPM1MQ96MI6 270 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 SLC12A9Q9BXP2 914 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 SPHK1Q9NYA1 384 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 TLK1Q9UKI8 766 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 CLCA2Q9UQC9 943 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 ACOT9Q9Y305 439 aa17.33■□□□□ 0.37
PDLIM7-202ENST00000355841 WDFY3Q8IZQ1 3526 aa17.33■□□□□ 0.36
PDLIM7-202ENST00000355841 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 ERLIN1O75477 346 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 TCEA3O75764 348 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 SLC16A8O95907 504 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 CDK4P11802 303 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 JUPP14923 745 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 CD1DP15813 335 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 PKLRP30613 574 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 SHMT2P34897 504 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 RAB28P51157 221 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 FASTKQ14296 549 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 PHF19Q5T6S3 580 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 LGSNQ5TDP6 509 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 SBSNQ6UWP8 590 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 TBC1D1Q86TI0 1168 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 OOSP2Q86WS3 158 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 CENPLQ8N0S6 344 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 PPFIBP2Q8ND30 876 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 MAGEC3Q8TD91 643 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 NXNL1Q96CM4 212 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 DERL2Q9GZP9 239 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 PARVBQ9HBI1 364 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 IGSF5Q9NSI5 407 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 IGHV5-10-1A0A0J9YXX1 117 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 GOLGA8RI6L899 631 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 MYO1CO00159 1063 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 RASGRF2O14827 1237 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 CSO75390 466 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 GUCA1CO95843 209 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 CHRM5P08912 532 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 MAGEA12P43365 314 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 TARDBPQ13148 414 aaKnown RBP eCLIP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 SQSTM1Q13501 440 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 OR4D1Q15615 310 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 TAF1BQ53T94 588 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 BEND6Q5SZJ8 279 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 ARMC6Q6NXE6 501 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 KLHL35Q6PF15 583 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 FBXO38Q6PIJ6 1188 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 WDR74Q6RFH5 385 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 SLITRK4Q8IW52 837 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 PLD6Q8N2A8 252 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 WDR48Q8TAF3 677 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 MCOLN3Q8TDD5 553 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 ISL2Q96A47 359 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 PTERQ96BW5 349 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 EPB41L1Q9H4G0 881 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 ZNF358Q9NW07 568 aa17.32■□□□□ 0.36
PDLIM7-202ENST00000355841 IQANK1A0A1B0GTG1 560 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 A0A1W2PPM1 405 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 RFPL1O75677 317 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 CYP2A7P20853 494 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 PEBP1P30086 187 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 GLRBP48167 497 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 SP140Q13342 867 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 TSTA3Q13630 321 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 ISXQ2M1V0 245 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 TMEM71Q6P5X7 295 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 PLXDC1Q8IUK5 500 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 FAM20CQ8IXL6 584 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 OR4D9Q8NGE8 314 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 CCDC74BQ96LY2 380 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 ABCF3Q9NUQ8 709 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 EURLQ9NYK6 297 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 OR6C2Q9NZP2 312 aa17.31■□□□□ 0.36
PDLIM7-202ENST00000355841 COL27A1Q8IZC6 1860 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 A0A087X1B8 175 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 SLC16A5O15375 505 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 KDM1AO60341 852 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 RASSF9O75901 435 aa17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 LTA4HP09960 611 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-202ENST00000355841 TFEBP19484 476 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms