RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SLC30A3Q99726 388 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 ADNPQ9H2P0 1102 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 MRM3Q9HC36 420 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 BFARQ9NZS9 450 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 PCDHB3Q9Y5E6 796 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 MEN1O00255 615 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 MATN2O00339 956 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 MT-ND3P03897 115 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 CCNYL3P0C7X3 344 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 MSL3P1P0C860 447 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 CBSLP0DN79 551 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 RPS3P23396 243 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 PTPN4P29074 926 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 CBSP35520 551 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 EIF3BP55884 814 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 GBX1Q14549 363 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 TYSND1Q2T9J0 566 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 TMTC4Q5T4D3 741 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 BPHLQ86WA6 291 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 ADAMTS17Q8TE56 1095 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 DENND1AQ8TEH3 1009 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 MAGOHBQ96A72 148 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 FAM117AQ9C073 453 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 TP53TG5Q9Y2B4 290 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 MED16Q9Y2X0 877 aa16.14■□□□□ 0.17
PDLIM7-201ENST00000355572 A0A0J9YY10 115 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 C21orf140B9A014 251 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ZNF749O43361 778 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 PRICKLE3O43900 615 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 CNOT3O75175 753 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 MAGP20916 626 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 PSMB5P28074 263 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 FMO4P31512 558 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 MAGEA3P43357 314 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 MC1RQ01726 317 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 KIAA0930Q6ICG6 404 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ZNF449Q6P9G9 518 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 CCDC137Q6PK04 289 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 DNAJC22Q8N4W6 341 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 DTWD1Q8N5C7 304 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ENDOVQ8N8Q3 282 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 OR8K5Q8NH50 307 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 C9orf43Q8TAL5 461 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 LRFN5Q96NI6 719 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ACTR5Q9H9F9 607 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 POLG2Q9UHN1 485 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ANAPC5Q9UJX4 755 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 KCND3Q9UK17 655 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 POLHQ9Y253 713 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 FARSAQ9Y285 508 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 CRYL1Q9Y2S2 319 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 JRKLQ9Y4A0 524 aa16.13■□□□□ 0.17
PDLIM7-201ENST00000355572 ZCWPW2A0A1B0GU75 182 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 ISM1B1AKI9 464 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 MASP2O00187 686 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 FANCGO15287 622 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 BANF1O75531 89 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 C1orf105O95561 183 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 ITGAXP20702 1163 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 PTGIRP43119 386 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 GCGRP47871 477 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 TTPAP49638 278 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 ITGA1P56199 1179 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 CDK16Q00536 496 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 UGT8Q16880 541 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 SLC5A12Q1EHB4 618 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 DNAJC21Q5F1R6 531 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 IZUMO3Q5VZ72 239 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 FCRL6Q6DN72 434 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 PTRHD1Q6GMV3 140 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 CYB5D1Q6P9G0 228 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 C4orf22Q6V702 233 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 DENND6AQ8IWF6 608 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 SYTL1Q8IYJ3 562 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 NAT8LQ8N9F0 302 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 GIMAP7Q8NHV1 300 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 ASZ1Q8WWH4 475 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 CLIP3Q96DZ5 547 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 PBKQ96KB5 322 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 SERPINB12Q96P63 405 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 EPN3Q9H201 632 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 SYNPO2LQ9H987 977 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 OR6C2Q9NZP2 312 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 DHCR7Q9UBM7 475 aaKnown RBP16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 GNPTGQ9UJJ9 305 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 TUBD1Q9UJT1 453 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 TLK1Q9UKI8 766 aa16.12■□□□□ 0.17
PDLIM7-201ENST00000355572 A0A1W2PPV9 198 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 NDUFS3O75489 264 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 APOA4P06727 396 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 CYP2A7P20853 494 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 CD9P21926 228 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 RAB28P51157 221 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 FASTKQ14296 549 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 SLC9A5Q14940 896 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 ANKRD20A4Q4UJ75 823 aa16.11■□□□□ 0.17
PDLIM7-201ENST00000355572 ACSBG2Q5FVE4 666 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms