RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 CILP2Q8IUL8 1156 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 SLC35G5Q96KT7 338 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 MYH8P13535 1937 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 PITX1P78337 314 aaPredicted RBP15.69■□□□□ 0.1
PTPN11-201ENST00000351677 MPP2Q14168 576 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 ATAT1Q5SQI0 421 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 JAZF1Q86VZ6 243 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 OR4F6Q8NGB9 312 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 GMLQ99445 158 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 CGREF1Q99674 301 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 KCNS3Q9BQ31 491 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 BCL2L14Q9BZR8 327 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 ZBTB26Q9HCK0 441 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 NKIRAS2Q9NYR9 191 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 PI15O43692 258 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 FAM163BP0C2L3 166 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 TFPIP10646 304 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 SLBPQ14493 270 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTPN11-201ENST00000351677 OR4F3Q6IEY1 312 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 SMARCD3Q6STE5 483 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 C14orf80Q86SX3 495 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 AMZ2Q86W34 360 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 GPR135Q8IZ08 494 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 SIX5Q8N196 739 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 PIGXQ8TBF5 258 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 ADAM7Q9H2U9 754 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 AMBNQ9NP70 447 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 VPS29Q9UBQ0 182 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 DNAJB4Q9UDY4 337 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 CYTH4Q9UIA0 394 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 KAT6AQ92794 2004 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 ARVCFO00192 962 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 WNT9AO14904 365 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 NUS1Q96E22 293 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 COPS4Q9BT78 406 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 DPEP2Q9H4A9 486 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 IL36AQ9UHA7 158 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 CHST10O43529 356 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 KRT33AO76009 404 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 CDH15P55291 814 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 C1QTNF8P60827 252 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 DAG1Q14118 895 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 C6orf89Q6UWU4 347 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 Q6ZVU0 165 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 GOLGA7Q7Z5G4 137 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 OR5AK3PQ8NH89 298 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 TVP23BQ9NYZ1 205 aa15.69■□□□□ 0.1
PTPN11-201ENST00000351677 GPC6Q9Y625 555 aaPredicted RBP15.69■□□□□ 0.1
PTPN11-201ENST00000351677 A0A1W2PRB8 838 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 LRRC72A6NJI9 287 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 ENGP17813 658 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 PEG10Q86TG7 708 aaKnown RBP15.68■□□□□ 0.1
PTPN11-201ENST00000351677 HDDC3Q8N4P3 179 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 C7orf43Q8WVR3 580 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 RASSF5Q8WWW0 418 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 CEP295NLQ96MC4 621 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 SLC32A1Q9H598 525 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 COMMD9Q9P000 198 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 RFPL1O75677 317 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 NDUFA5Q16718 116 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 RNF19BQ6ZMZ0 732 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 TMEM74Q96NL1 305 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 GPATCH1Q9BRR8 931 aaKnown RBP15.68■□□□□ 0.1
PTPN11-201ENST00000351677 DNAAF2Q9NVR5 837 aaKnown RBP15.68■□□□□ 0.1
PTPN11-201ENST00000351677 FAM53CQ9NYF3 392 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 PTTG2Q9NZH5 202 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 ING4Q9UNL4 249 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 RGPD2P0DJD1 1756 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 SLC30A4O14863 429 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 PRKD3O94806 890 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 PGLSO95336 258 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 VARSP26640 1264 aaKnown RBP15.68■□□□□ 0.1
PTPN11-201ENST00000351677 SCARB2Q14108 478 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 FCRL3Q96P31 734 aaPredicted RBP15.68■□□□□ 0.1
PTPN11-201ENST00000351677 Q9Y3F1 56 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 LOC730098B7Z3J9 87 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 CLIC1O00299 241 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 BEST1O76090 585 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 PRPS1L1P21108 318 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 TARDBPQ13148 414 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPN11-201ENST00000351677 FAM91A1Q658Y4 838 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 PDPRQ8NCN5 879 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 HERVK_113Q902F9 699 aa15.68■□□□□ 0.1
PTPN11-201ENST00000351677 FAM240BA0A1B0GVZ2 78 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 BTN3A3O00478 584 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 MPZL2O60487 215 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 OPN1SWP03999 348 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 DLDP09622 509 aaKnown RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 SLC11A1P49279 550 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ILF3Q12906 894 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 PPIGQ13427 754 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 USP30Q70CQ3 517 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 YIPF4Q9BSR8 244 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 RIIAD1A6NNX1 92 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ZNF99A8MXY4 864 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 GSK3BP49841 420 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 STXBP1P61764 594 aaKnown RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 MINDY4Q4G0A6 757 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms