RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 DNAJB9Q9UBS3 223 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 ANKRD33BA6NCL7 494 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 FAM220BPB1ANY3 271 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 LEFTY2O00292 366 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 RETP07949 1114 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 C1SP09871 688 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 THRBP10828 461 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 PCNAP12004 261 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 PCSK2P16519 638 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 SLC6A12P48065 614 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 HLCSP50747 726 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 CREMQ03060 361 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 TLE2Q04725 743 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 BOP1Q14137 746 aaKnown RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 DNAJC14Q6Y2X3 702 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 MICU2Q8IYU8 434 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 CMTM8Q8IZV2 173 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 ZNF296Q8WUU4 475 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 ZNF641Q96N77 438 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 KCNH6Q9H252 994 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 LIMD1Q9UGP4 676 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 ZNHIT2Q9UHR6 403 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 CXCR6O00574 342 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 MPC1LP0DKB6 136 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 PRPS2P11908 318 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 HNMTP50135 292 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 SP140Q13342 867 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 FAM117BQ6P1L5 589 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 RFLNAQ6ZTI6 216 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 GPR149Q86SP6 731 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 GPR180Q86V85 440 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 CALHM3Q86XJ0 350 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 ZDHHC13Q8IUH4 622 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 CLVS1Q8IUQ0 354 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-201ENST00000351487 FBXO30Q8TB52 745 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 SELENOMQ8WWX9 145 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 ASB11Q8WXH4 323 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 SLC47A1Q96FL8 570 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 CPPED1Q9BRF8 314 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-201ENST00000351487 CEP44Q9C0F1 390 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 SERHLQ9NQF3 203 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 SNX6Q9UNH7 406 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 INVSQ9Y283 1065 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 DLGAP4Q9Y2H0 992 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 NRG2O14511 850 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-201ENST00000351487 TGM5O43548 720 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 HOXB9P17482 250 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-201ENST00000351487 SPINT3P49223 89 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 PHC1P78364 1004 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 TRIM60Q495X7 471 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 GTDC1Q4AE62 458 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 STK32CQ86UX6 486 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 CLEC4FQ8N1N0 589 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 L3MBTL4Q8NA19 623 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 ZNF420Q8TAQ5 688 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-201ENST00000351487 POP5Q969H6 163 aaKnown RBP21.59■■□□□ 1.05
UPF3A-201ENST00000351487 ETAA1Q9NY74 926 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 TBX21Q9UL17 535 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 TMPRSS11EQ9UL52 423 aa21.59■■□□□ 1.05
UPF3A-201ENST00000351487 MYOFQ9NZM1 2061 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 A0A096LPI6 279 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 POP4O95707 220 aaKnown RBP21.58■■□□□ 1.05
UPF3A-201ENST00000351487 LRG1P02750 347 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 PFKLP17858 780 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 CTBSQ01459 385 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 CBX2Q14781 532 aaPredicted RBP21.58■■□□□ 1.05
UPF3A-201ENST00000351487 PLCL1Q15111 1095 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 DHRS4L2Q6PKH6 230 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 ARHGAP22Q7Z5H3 698 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 SVOPLQ8N434 492 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 CLHC1Q8NHS4 586 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 GAB3Q8WWW8 586 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 TESCQ96BS2 214 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 AURKBQ96GD4 344 aaPredicted RBP21.58■■□□□ 1.05
UPF3A-201ENST00000351487 MUS81Q96NY9 551 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 MAGIXQ9H6Y5 334 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 LIN28AQ9H9Z2 209 aaKnown RBP21.58■■□□□ 1.05
UPF3A-201ENST00000351487 SLC6A13Q9NSD5 602 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 PCDHB14Q9Y5E9 798 aa21.58■■□□□ 1.05
UPF3A-201ENST00000351487 ABHD14A-ACY1A0A1B0GW23 586 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 A0A1W2PQ67 120 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 G3V2T6 193 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 SLC16A5O15375 505 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 ACPPP15309 386 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HOXB6P17509 224 aaKnown RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 IL1RNP18510 177 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 GZMMP51124 257 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 DEFB103AP81534 67 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 CARD16Q5EG05 197 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 DPY19L3Q6ZPD9 716 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 FAM162AQ96A26 154 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 SDCCAG3Q96C92 435 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 MTFMTQ96DP5 389 aaKnown RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HHIPQ96QV1 700 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 DOK1Q99704 481 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 ABCG8Q9H221 673 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 ELOVL6Q9H5J4 265 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 ZDHHC6Q9H6R6 413 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 BRD9Q9H8M2 597 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 DCAF13Q9NV06 445 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms