RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 B3GNT4Q9C0J1 378 aa10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 TFB2MQ9H5Q4 396 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 RBM22Q9NW64 420 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 UTS2RQ9UKP6 389 aa10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 NUP50Q9UKX7 468 aa10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 AGO1Q9UL18 857 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 NDRG4Q9ULP0 352 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 PIN4Q9Y237 131 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 GMPPBQ9Y5P6 360 aa10.12□□□□□ -0.79
CHRNA1-202ENST00000348749 OR5K3A6NET4 321 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 MROH6A6NGR9 719 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 LRRC14BA6NHZ5 514 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 IRAK2O43187 625 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 DFNA5O60443 496 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 MITFO75030 526 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 SLC4A1P02730 911 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 HLA-DQB2P05538 268 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 FDXRP22570 491 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ERP29P30040 261 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 FMO4P31512 558 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 TIE1P35590 1138 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 RFX2P48378 723 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 WNT3AP56704 352 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 TAGLNQ01995 201 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ACVR1Q04771 509 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 IRF5Q13568 498 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 SYT16Q17RD7 645 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ATP6AP1LQ52LC2 224 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ESCO2Q56NI9 601 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 GJC2Q5T442 439 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 CYP20A1Q6UW02 462 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ZNF767PQ75MW2 155 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 GPR149Q86SP6 731 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 CYP4Z1Q86W10 505 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 GPC2Q8N158 579 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ST13P5Q8NFI4 369 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 BLOC1S5Q8TDH9 187 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 IMP4Q96G21 291 aaKnown RBP10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 PCED1BQ96HM7 432 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 ZNF599Q96NL3 588 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 NEDD4LQ96PU5 975 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 SLC39A8Q9C0K1 460 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 IPPQ9Y573 584 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 PATJQ8NI35 1801 aa10.11□□□□□ -0.79
CHRNA1-202ENST00000348749 A0A0U1RQS6 177 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 CA12O43570 354 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 PMPCBO75439 489 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 CRCPO75575 148 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SLITRK5O94991 958 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 S1PR4O95977 384 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 UROSP10746 265 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 CCR1P32246 355 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SOX6P35712 828 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ADCYAP1R1P41586 468 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 NRIP1P48552 1158 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 RENBPP51606 427 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 C5orf22Q49AR2 442 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 FBXO43Q4G163 708 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 TOR1AIP1Q5JTV8 583 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 PIK3R6Q5UE93 754 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 CPZQ66K79 652 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 KDM4DQ6B0I6 523 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 GPRIN1Q7Z2K8 1008 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SYVN1Q86TM6 617 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 TCTE3Q8IZS6 198 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 RTL3Q8N8U3 475 aaKnown RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 GTF2H4Q92759 462 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SNAPC3Q92966 411 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 FAM162AQ96A26 154 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ITCHQ96J02 903 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ATOH8Q96SQ7 321 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 PITX2Q99697 317 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SGIP1Q9BQI5 828 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SLC30A2Q9BRI3 323 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 TRAF4Q9BUZ4 470 aaPredicted RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 RIBC2Q9H4K1 309 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ELP3Q9H9T3 547 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 RANGRFQ9HD47 186 aaPredicted RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 HEBP1Q9NRV9 189 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 DCAF13Q9NV06 445 aaKnown RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 KLK14Q9P0G3 267 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 EVLQ9UI08 416 aaPredicted RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 AP3M1Q9Y2T2 418 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 A0A075B6Q4 140 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ELOVL7A1L3X0 281 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 E9PQ18 207 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 CXCR6O00574 342 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ANKRD28O15084 1053 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 MUSKO15146 869 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 TMCC2O75069 709 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 MTRF1O75570 445 aaKnown RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ETV3P41162 512 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 CRYBB1P53674 252 aaPredicted RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 ELP6Q0PNE2 266 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 PPP1R8Q12972 351 aaKnown RBP10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SLAMF1Q13291 335 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 TNK1Q13470 666 aa10.1□□□□□ -0.79
CHRNA1-202ENST00000348749 SIM2Q14190 667 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms