RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 NXPE1Q8N323 547 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 TTC29Q8NA56 475 aaPredicted RBP12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 L3HYPDHQ96EM0 354 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 C8orf4Q9NR00 106 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 PCTPQ9UKL6 214 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 SLC9A3R1O14745 358 aaPredicted RBP12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 DENRO43583 198 aaKnown RBP12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 ENGP17813 658 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 CTSKP43235 329 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 ATP4BP51164 291 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 APLP1P51693 650 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 ARSFP54793 590 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 CARTPTQ16568 116 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 CARD16Q5EG05 197 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 GPRC6AQ5T6X5 926 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 EIF3MQ7L2H7 374 aaKnown RBP12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 TRIM48Q8IWZ4 208 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 KRT78Q8N1N4 520 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 MINDY1Q8N5J2 469 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 XAGE5Q8WWM1 108 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 PEX13Q92968 403 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 DUSP26Q9BV47 211 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 CD244Q9BZW8 370 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 SLAMF8Q9P0V8 285 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
DNMT3B-203ENST00000348286 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 QSOX1O00391 747 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 FBP2O00757 339 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 SMAD6O43541 496 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ERN1O75460 977 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 CREG1O75629 220 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 NR2F1P10589 423 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 PREPP48147 710 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 CDH12P55289 794 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ZNF648Q5T619 568 aaPredicted RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 GALNT10Q86SR1 603 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 CHPFQ8IZ52 775 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 C11orf65Q8NCR3 313 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 TIFAQ96CG3 184 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 TOR3AQ9H497 397 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 NOL6Q9H6R4 1146 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 TTC3P53804 2025 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 C8GP07360 202 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 GPX3P22352 226 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 KRT20P35900 424 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 GTDC1Q4AE62 458 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 MTSS1LQ765P7 747 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 C1orf52Q8N6N3 182 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 PACRGLQ8N7B6 248 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 GTPBP3Q969Y2 492 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 SLC39A13Q96H72 371 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 TPK1Q9H3S4 243 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 RPF2Q9H7B2 306 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 PREBQ9HCU5 417 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 SDR39U1Q9NRG7 319 aaPredicted RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 IMP3Q9NV31 184 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 UBAP1Q9NZ09 502 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 VPS29Q9UBQ0 182 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 KLHL20Q9Y2M5 609 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 LOC285095A0A1B0GVY8 99 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 TNFRSF11BO00300 401 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 CYP7B1O75881 506 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 MED26O95402 600 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ASLP04424 464 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 OXTRP30559 389 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ENTPD1P49961 510 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 CDK9P50750 372 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 RPS7P62081 194 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 FOXM1Q08050 763 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 MADCAM1Q13477 382 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 SYT16Q17RD7 645 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 EGFLAMQ63HQ2 1017 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 CES5AQ6NT32 575 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 PPP4R4Q6NUP7 873 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 DPY19L3Q6ZPD9 716 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 ERI1Q8IV48 349 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 SLC22A17Q8WUG5 538 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 HTATIP2Q9BUP3 242 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 OR2AG1Q9H205 316 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 RHBGQ9H310 441 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 FARSBQ9NSD9 589 aaKnown RBP12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 WNT6Q9Y6F9 365 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 F5P12259 2224 aa12.81□□□□□ -0.36
DNMT3B-203ENST00000348286 TNFRSF10BO14763 440 aa12.8□□□□□ -0.36
DNMT3B-203ENST00000348286 RGS10O43665 173 aa12.8□□□□□ -0.36
DNMT3B-203ENST00000348286 HOXD8P13378 290 aaPredicted RBP12.8□□□□□ -0.36
DNMT3B-203ENST00000348286 HMGCLP35914 325 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms