RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CEP350Q5VT06 3117 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PNMA8CA0A1B0GUJ8 204 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ELOVL7A1L3X0 281 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 METTL15A6NJ78 407 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PSMD11O00231 422 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PPP6CO00743 305 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PRMT5O14744 637 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 MAN1A2O60476 641 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 DLGAP3O95886 979 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 APOA1P02647 267 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PCNAP12004 261 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 OR1D2P34982 312 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PPM1AP35813 382 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PPP3CCP48454 512 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 VBP1P61758 197 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 VAC14Q08AM6 782 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 RAB33AQ14088 237 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 C6orf183Q5T699 404 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF549Q6P9A3 640 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TTC23LQ6PF05 361 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SHQ1Q6PI26 577 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SYVN1Q86TM6 617 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PIM3Q86V86 326 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 AMER2Q8N7J2 671 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 RTL3Q8N8U3 475 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 GLB1L3Q8NCI6 653 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SLC38A4Q969I6 547 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 FAM162AQ96A26 154 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 RPL10LQ96L21 214 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 CLSTN3Q9BQT9 956 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 NXF2Q9GZY0 626 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SEMA4BQ9NPR2 832 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 CCDC177Q9NQR7 707 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 CCDC59Q9P031 241 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SLAMF8Q9P0V8 285 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ERVK-18Q9QC07 812 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PCTPQ9UKL6 214 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 USP22Q9UPT9 525 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 MYO16Q9Y6X6 1858 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 PABPN1LA6NDY0 278 aaKnown RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 EFCAB9A8MZ26 197 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 CXCR6O00574 342 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 RAD51BO15315 384 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 NOBOXO60393 691 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 RPP40O75818 363 aaKnown RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 SLC4A1P02730 911 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 CSF2RAP15509 400 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 PCSK2P16519 638 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 CD9P21926 228 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 PSMB9P28065 219 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 AKT1P31749 480 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 ARHGDIAP52565 204 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 CREMQ03060 361 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 PIGFQ07326 219 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 MAD2L1Q13257 205 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 MAPK11Q15759 364 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 PCSK7Q16549 785 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 TYSND1Q2T9J0 566 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 UBE2UQ5VVX9 321 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 TMEM236Q5W0B7 351 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF544Q6NX49 715 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 USP43Q70EL4 1123 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 B3GNT8Q7Z7M8 397 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 GPR149Q86SP6 731 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 PPM1MQ96MI6 270 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 TP63Q9H3D4 680 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 NOL6Q9H6R4 1146 aaKnown RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 IL23AQ9NPF7 189 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 ACOT13Q9NPJ3 140 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 ABCB10Q9NRK6 738 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.53■□□□□ 0.087e-16■■□□□ 11.5
HMGA1-202ENST00000347617 TAS2R13Q9NYV9 303 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 MARCH4Q9P2E8 410 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 TMEFF2Q9UIK5 374 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 MAGED1Q9Y5V3 778 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-202ENST00000347617 HS3ST4Q9Y661 456 aa15.53■□□□□ 0.08
HMGA1-202ENST00000347617 IGLV3-10A0A075B6K4 115 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 LRRC14BA6NHZ5 514 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 FAM220BPB1ANY3 271 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 IDH3BO43837 385 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 ECI2O75521 394 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 ATF6P18850 670 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 EFNA1P20827 205 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-202ENST00000347617 IGFBP5P24593 272 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 ITGB8P26012 769 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 S100A5P33763 92 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 MTPNP58546 118 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 TIAL1Q01085 375 aaKnown RBP eCLIP15.52■□□□□ 0.08
HMGA1-202ENST00000347617 CYP4F3Q08477 520 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 CAMK2BQ13554 666 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 RBBP7Q16576 425 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 SPOUT1Q5T280 376 aaKnown RBP15.52■□□□□ 0.08
HMGA1-202ENST00000347617 ATG9BQ674R7 924 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 MICU2Q8IYU8 434 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 CARNMT1Q8N4J0 409 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 KBTBD8Q8NFY9 601 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 FBXO30Q8TB52 745 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 FIG4Q92562 907 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 TADA1Q96BN2 335 aa15.52■□□□□ 0.08
HMGA1-202ENST00000347617 TRMT2BQ96GJ1 504 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms