RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 HSPA12AO43301 675 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 OAZ2O95190 189 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 MAPK14Q16539 360 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 FAM174BQ3ZCQ3 159 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 CRYBG2Q8N1P7 616 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 DNASE1L2Q92874 299 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 FKBP10Q96AY3 582 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ST6GALNAC4Q9H4F1 302 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 M0R129 80 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 CBSLP0DN79 551 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 SRCP12931 536 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 CBSP35520 551 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 JAM2P57087 298 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ZNF709Q8N972 641 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ALG3Q92685 438 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ITM2CQ9NQX7 267 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 KIF13BQ9NQT8 1826 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 USP12O75317 370 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 MAP3K8P41279 467 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 RHDQ02161 417 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 NPTX1Q15818 432 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 CTC1Q2NKJ3 1217 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 SPATA22Q8NHS9 363 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 PIGKQ92643 395 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 AZIN2Q96A70 460 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TBC1D17Q9HA65 648 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TTLL8A6PVC2 850 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TGM6O95932 706 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 HOXC12P31275 282 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 MC4RP32245 332 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 CYP4F8P98187 520 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 NKAPLQ5M9Q1 402 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 FAM171A1Q5VUB5 890 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 IL23RQ5VWK5 629 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 RAET1GQ6H3X3 334 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ELMOD2Q8IZ81 293 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ZBTB2Q8N680 514 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 DNAJC19Q96DA6 116 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TFB2MQ9H5Q4 396 aaKnown RBP13.07□□□□□ -0.32
COL6A3-202ENST00000347401 SNTG1Q9NSN8 517 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 HCN3Q9P1Z3 774 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 GABRDO14764 452 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 SPAM1P38567 509 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ATP4BP51164 291 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ORC1Q13415 861 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 OGFOD2Q6N063 350 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 CNPPD1Q9BV87 410 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 NDUFAF4Q9P032 175 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 BTRCQ9Y297 605 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 MYPNQ86TC9 1320 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 MPSTP25325 297 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 WNT3AP56704 352 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 LDLRAP1Q5SW96 308 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 C6orf183Q5T699 404 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 GPRC6AQ5T6X5 926 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TCTEX1D2Q8WW35 142 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
COL6A3-202ENST00000347401 C7orf50Q9BRJ6 194 aaKnown RBP13.07□□□□□ -0.32
COL6A3-202ENST00000347401 TSTD3H0UI37 97 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 ACTC1P68032 377 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 ACTA1P68133 377 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 CD83Q01151 205 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 C1orf216Q8TAB5 229 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 CEP41Q9BYV8 373 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 ZNF823P16415 610 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 CDH13P55290 713 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 RAPSNQ13702 412 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 RALGPS1Q5JS13 557 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 SLC22A16Q86VW1 577 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 FAM46DQ8NEK8 389 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 TESCQ96BS2 214 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 C16orf58Q96GQ5 468 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 AGO3Q9H9G7 860 aaKnown RBP13.06□□□□□ -0.32
COL6A3-202ENST00000347401 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 STUB1Q9UNE7 303 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 OR2AG2A6NM03 316 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 KLRC4O43908 158 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 ZSCAN5DPP0CG00 497 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 RYKP34925 604 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 MPIP34949 423 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 GPR158Q5T848 1215 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
COL6A3-202ENST00000347401 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 GIMAP5Q96F15 307 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 KIAA1522Q9P206 1035 aaPredicted RBP13.06□□□□□ -0.32
COL6A3-202ENST00000347401 H0Y858 1186 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 INMTO95050 263 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
COL6A3-202ENST00000347401 PPM1AP35813 382 aa13.06□□□□□ -0.32
COL6A3-202ENST00000347401 SLC1A5Q15758 541 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms