RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 UHRF1Q96T88 793 aaPredicted RBP20.89■□□□□ 0.94
TSPAN3-202ENST00000346495 TBC1D10AQ9BXI6 508 aa20.89■□□□□ 0.94
TSPAN3-202ENST00000346495 ACTR8Q9H981 624 aa20.89■□□□□ 0.94
TSPAN3-202ENST00000346495 TM7SF3Q9NS93 570 aa20.89■□□□□ 0.94
TSPAN3-202ENST00000346495 TAS2R1Q9NYW7 299 aa20.89■□□□□ 0.94
TSPAN3-202ENST00000346495 ACSL5Q9ULC5 683 aa20.89■□□□□ 0.94
TSPAN3-202ENST00000346495 KRBA1A5PL33 1030 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 PRR35P0CG20 571 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 ITPKAP23677 461 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 IMPA1P29218 277 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 GGTA1PQ4G0N0 100 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 TCHHL1Q5QJ38 904 aaPredicted RBP20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 OGFOD2Q6N063 350 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 IL27RAQ6UWB1 636 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 CHST15Q7LFX5 561 aaPredicted RBP20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 SPATA19Q7Z5L4 167 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 GALNT13Q8IUC8 556 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 OR9A1PQ8NGU1 263 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 OR56A3Q8NH54 315 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 RP9Q8TA86 221 aaKnown RBP20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 NELL2Q99435 816 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 C1orf21Q9H246 121 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 RNF11Q9Y3C5 154 aa20.89■□□□□ 0.93
TSPAN3-202ENST00000346495 UNC80Q8N2C7 3258 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 KANSL1LA0AUZ9 987 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 IFRD1O00458 451 aaPredicted RBP20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 SLC16A8O95907 504 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 FUCA1P04066 466 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 RPN2P04844 631 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 KRT16P08779 473 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 KELP23276 732 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 OXTRP30559 389 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 STX1BP61266 288 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 MXRA7P84157 204 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 ZP2Q05996 745 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 NAE1Q13564 534 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 PYCR3Q53H96 274 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 TMEM31Q5JXX7 168 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 ANO7Q6IWH7 933 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 SCIMPQ6UWF3 145 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 THOC6Q86W42 341 aaKnown RBP20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 TSTD1Q8NFU3 115 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 SCARF2Q96GP6 870 aaPredicted RBP20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 ASF1AQ9Y294 204 aa20.88■□□□□ 0.93
TSPAN3-202ENST00000346495 EYSQ5T1H1 3165 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 LOC100653049A0A140TA62 436 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 POM121BA6NF01 834 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 C10orf142B7Z368 130 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 LATO43561 262 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 KRT34O76011 436 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 ACP5P13686 325 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 AKT2P31751 481 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 HTR6P50406 440 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 CCR5P51681 352 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 CLDN2P57739 230 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 FZD5Q13467 585 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 GRB7Q14451 532 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 NFATC4Q14934 902 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 DNAL1Q4LDG9 190 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 LONP2Q86WA8 852 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 L3MBTL4Q8NA19 623 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 TFGQ92734 400 aaPredicted RBP20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 MED8Q96G25 268 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 MIPEPQ99797 713 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 SLC40A1Q9NP59 571 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 KLQ9UEF7 1012 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 MOSPD1Q9UJG1 213 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 SUFUQ9UMX1 484 aa20.87■□□□□ 0.93
TSPAN3-202ENST00000346495 FAM170BA6NMN3 283 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 UGDHO60701 494 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 KRT6AP02538 564 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 KRT6BP04259 564 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 ALDOCP09972 364 aaKnown RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 SLC35G4P0C7Q5 338 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 KRT6CP48668 564 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 CYLC2Q14093 348 aaPredicted RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 MAPRE2Q15555 327 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 GSTA3Q16772 222 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 SNX32Q86XE0 403 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 MYLK4Q86YV6 388 aaPredicted RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 DCUN1D3Q8IWE4 304 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 RBM15BQ8NDT2 890 aaKnown RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 SPDYE1Q8NFV5 336 aaPredicted RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 OR2T11Q8NH01 316 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 RAD51AP1Q96B01 352 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 RTKNQ9BST9 563 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 INTS7Q9NVH2 962 aaKnown RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 GIMAP2Q9UG22 337 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 GPSM3Q9Y4H4 160 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 PSMD12O00232 456 aaPredicted RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 SLC28A1O00337 649 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 MANBAO00462 879 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 TOR1BO14657 336 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 GSC2O15499 205 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 PEX11AO75192 247 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 ULK1O75385 1050 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 APBB3O95704 486 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 PTK2BQ14289 1009 aa20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 FASTKQ14296 549 aaKnown RBP20.86■□□□□ 0.93
TSPAN3-202ENST00000346495 GAS6Q14393 721 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms