RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MRPL40Q9NQ50 206 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 SDR39U1Q9NRG7 319 aaPredicted RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 NDRG2Q9UN36 371 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
CDC42-202ENST00000344548 CFAP20Q9Y6A4 193 aaKnown RBP13.22□□□□□ -0.29
CDC42-202ENST00000344548 CHEK2O96017 543 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 EBLN1P0CF75 366 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 CAPN3P20807 821 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 IL12AP29459 219 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 HNMTP50135 292 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 AP1S2P56377 157 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 UFM1P61960 85 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 LAYNQ6UX15 382 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 KYQ8NBH2 561 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 FBXL8Q96CD0 374 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 CCDC124Q96CT7 223 aaKnown RBP13.21□□□□□ -0.29
CDC42-202ENST00000344548 SLC39A3Q9BRY0 314 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 ZCCHC2Q9C0B9 1178 aaKnown RBP13.21□□□□□ -0.29
CDC42-202ENST00000344548 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 ACTL8Q9H568 366 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 ACTR8Q9H981 624 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 SH2B3Q9UQQ2 575 aa13.21□□□□□ -0.29
CDC42-202ENST00000344548 MGAT4DA6NG13 374 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 H0Y3Z8 333 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 H0Y8X5 98 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 LIN7AO14910 233 aaPredicted RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 CFLARO15519 480 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 RSL1D1O76021 490 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 CLDN9O95484 217 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 RPL10P27635 214 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 RPS21P63220 83 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 GTF2H3Q13889 308 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 LRP8Q14114 963 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 SNCBQ16143 134 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 VPS26BQ4G0F5 336 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 LRRC70Q7Z2Q7 622 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 RGL4Q8IZJ4 473 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 FNDC5Q8NAU1 212 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 ZNF480Q8WV37 535 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 MED8Q96G25 268 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 GAS2L1Q99501 681 aaPredicted RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 WDR26Q9H7D7 661 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 C8orf33Q9H7E9 229 aaPredicted RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 AIG1Q9NVV5 245 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 PLAGL1Q9UM63 463 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 POM121BA6NF01 834 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 E7EQ34 232 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 MANBAO00462 879 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 PDYNP01213 254 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 SNRPB2P08579 225 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 MAP4P27816 1152 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 CLDN2P57739 230 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 NR6A1Q15406 480 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 AP5B1Q2VPB7 878 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 REP15Q6BDI9 236 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 METTL2BQ6P1Q9 378 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 THOC6Q86W42 341 aaKnown RBP13.2□□□□□ -0.3
CDC42-202ENST00000344548 FAM3CQ92520 227 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 DNASE1L2Q92874 299 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 USP7Q93009 1102 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 IL17FQ96PD4 163 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 CDRT15Q96T59 188 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 DNAJC11Q9NVH1 559 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
CDC42-202ENST00000344548 C17orf113A0A1B0GUU1 675 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ASPDHA6ND91 283 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 NR5A2O00482 541 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 KRT36O76013 467 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 WFS1O76024 890 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 CATP04040 527 aaKnown RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 G6PDP11413 515 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ACADVLP49748 655 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ATP4BP51164 291 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ERVK-8P63133 956 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 MRPS21P82921 87 aaKnown RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 SGCGQ13326 291 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 CEACAM7Q14002 265 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TPRG1LQ5T0D9 272 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 KIAA1324Q6UXG2 1013 aaKnown RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 CHST15Q7LFX5 561 aaPredicted RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 AMZ2Q86W34 360 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 HORMAD1Q86X24 394 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 MIER2Q8N344 545 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TCAIMQ8N3R3 496 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 C2orf73Q8N5S3 287 aaPredicted RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 FAM156AQ8NDB6 213 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 OR5AR1Q8NGP9 310 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 PROKR1Q8TCW9 393 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 VPS33AQ96AX1 596 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 CCDC138Q96M89 665 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 ACPTQ9BZG2 426 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 WDR41Q9HAD4 459 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
CDC42-202ENST00000344548 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
CDC42-202ENST00000344548 TRPS1Q9UHF7 1281 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms