RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PGM5Q15124 567 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FAM196AQ6ZSG2 479 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TRMT1LQ7Z2T5 733 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BSNDQ8WZ55 320 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MUL1Q969V5 352 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CCDC17Q96LX7 622 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BTBD2Q9BX70 525 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ANO3Q9BYT9 981 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 NMUR2Q9GZQ4 415 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 WDR6Q9NNW5 1121 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PDE10AQ9Y233 779 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FAM186AA6NE01 2351 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 A0A0B4J293 547 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OR7A17O14581 309 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF208O43345 1280 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CPNE3O75131 537 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RGS11O94810 467 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MYF6P23409 242 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MBTD1Q05BQ5 628 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 EIF4HQ15056 248 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RAB12Q6IQ22 244 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 UNC5CLQ8IV45 518 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLC37A3Q8NCC5 494 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RSPRY1Q96DX4 576 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MRI1Q9BV20 369 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SPATA9Q9BWV2 254 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 JPH1Q9HDC5 661 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TAS2R9Q9NYW1 312 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ACTR3BQ9P1U1 418 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ASTN2O75129 1339 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 LOC100506127A0A0U1RQW1 187 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SCAMP3O14828 347 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ENTPD6O75354 484 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 INHBBP09529 407 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PLA2G4BP0C869 781 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ALDH4A1P30038 563 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CAMK2DQ13557 499 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RAB41Q5JT25 222 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 USP50Q70EL3 339 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ARMCX2Q7L311 632 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PNMA6EA0A0J9YXQ4 647 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 K7EPI3 171 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DLGAP1O14490 977 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OR2B3O76000 313 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM63AO94886 807 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 VAMP7P51809 220 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GLYATQ6IB77 296 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TRMT10BQ6PF06 316 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF527Q8NB42 609 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 REPS1Q96D71 796 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PLEKHF1Q96S99 279 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MTERF1Q99551 399 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ADPGKQ9BRR6 497 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CADM1Q9BY67 442 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 IL26Q9NPH9 171 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 EQTNQ9NQ60 294 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 UXTQ9UBK9 157 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CLDN24A6NM45 220 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 A8MUI8 341 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BOLA2-SMG1P6H3BVE0 249 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GLRA2P23416 452 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OMPP47874 163 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ATPAF1Q5TC12 328 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ALG1LQ6GMV1 187 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DIRAS2Q96HU8 199 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLITRK1Q96PX8 696 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CIPCQ9C0C6 399 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DAGLAQ9Y4D2 1042 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 NOX1Q9Y5S8 564 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HOXD8P13378 290 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GNSP15586 552 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 JUNDP17535 347 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PRKAG1P54619 331 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TFCP2Q12800 502 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SNX15Q9NRS6 342 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 INTS7Q9NVH2 962 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BTNL2Q9UIR0 455 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 H3BUI4 141 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ABCB7O75027 752 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CPNE6O95741 557 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 APOC3P02656 99 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PMELP40967 661 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SMIM12Q96EX1 92 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SPACA7Q96KW9 195 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TREX2Q9BQ50 279 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 VCX2Q9H322 139 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLAMF7Q9NQ25 335 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SPHK1Q9NYA1 384 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 KCNK2O95069 426 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PPIBP23284 216 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 YWHAQP27348 245 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 THBS3P49746 956 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BCAR1P56945 870 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ADAM8P78325 824 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RPA4Q13156 261 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CERS6Q6ZMG9 384 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FJX1Q86VR8 437 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 POU5F2Q8N7G0 328 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms