RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 FAHD1Q6P587 224 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 IL27RAQ6UWB1 636 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 TMC5Q6UXY8 1006 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 AHSA2Q719I0 299 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 RAVER1Q8IY67 606 aaKnown RBP9.46□□□□□ -0.9
HOXA1-201ENST00000343060 BRSK1Q8TDC3 778 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 NCLNQ969V3 563 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 MYLPFQ96A32 169 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 RNF170Q96K19 258 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 KLHL5Q96PQ7 755 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 RAD9AQ99638 391 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 GPR21Q99679 349 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 TBCDQ9BTW9 1192 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 TNKS2Q9H2K2 1166 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 SP110Q9HB58 689 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 TXNRD2Q9NNW7 524 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 PRDM5Q9NQX1 630 aaPredicted RBP9.46□□□□□ -0.9
HOXA1-201ENST00000343060 NUDT4Q9NZJ9 180 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 MPP6Q9NZW5 540 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 CRNNQ9UBG3 495 aaPredicted RBP9.46□□□□□ -0.9
HOXA1-201ENST00000343060 PIN4Q9Y237 131 aaKnown RBP9.46□□□□□ -0.9
HOXA1-201ENST00000343060 MAN2B2Q9Y2E5 1009 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 CARD8Q9Y2G2 431 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 WBP11Q9Y2W2 641 aaKnown RBP9.46□□□□□ -0.9
HOXA1-201ENST00000343060 PPP2R3BQ9Y5P8 575 aa9.46□□□□□ -0.9
HOXA1-201ENST00000343060 GOLGB1Q14789 3259 aaKnown RBP9.46□□□□□ -0.9
HOXA1-201ENST00000343060 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 NCF1BA6NI72 391 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 NCF1CA8MVU1 366 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 H3BQ06 376 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 EIF3FO00303 357 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 WNT9AO14904 365 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SSX4O60224 188 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PCDHGA12O60330 932 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PGLSO95336 258 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 RPLP0P05388 317 aaKnown RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 DBTP11182 482 aaKnown RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 NCF1P14598 390 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 HOXD11P31277 338 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 DNAJA1P31689 397 aaKnown RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PXNP49023 591 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 UGT2B15P54855 530 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ELP6Q0PNE2 266 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 VGLL4Q14135 290 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 STARD3Q14849 445 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SYT16Q17RD7 645 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 FAM174BQ3ZCQ3 159 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ZFP69Q49AA0 526 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ERAP2Q6P179 960 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 GPSM1Q86YR5 675 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SYTL1Q8IYJ3 562 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ANGPTL6Q8NI99 470 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 METTL6Q8TCB7 284 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 DNASE1L2Q92874 299 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 C1orf74Q96LT6 269 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 GABARAPL3Q9BY60 117 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 MIR1-1HGQ9H1L0 117 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 IL1RAPQ9NPH3 570 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 EHD3Q9NZN3 535 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PSORS1C1Q9UIG5 152 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 TBC1D24Q9ULP9 559 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ABCG2Q9UNQ0 655 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 FAM50BQ9Y247 325 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 CAB39Q9Y376 341 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 IPPQ9Y573 584 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 LYVE1Q9Y5Y7 322 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SRCAPQ6ZRS2 3230 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 A0A0U1RQS6 177 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 RRN3P2A6NIE6 340 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 OR7A17O14581 309 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 DPM1O60762 260 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ERN1O75460 977 aaKnown RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SEMA3DO95025 777 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PGRP06401 933 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 HAPLN1P10915 354 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 DPEP1P16444 411 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 RHOQP17081 205 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 GRK5P34947 590 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 MLLT6P55198 1093 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ITKQ08881 620 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 MAD2L1Q13257 205 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 TIGD6Q17RP2 521 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PARP15Q460N3 678 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 GTDC1Q4AE62 458 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 CCDC58Q4VC31 144 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SPANXN4Q5MJ08 99 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 MFSD4BQ5TF39 518 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 AFTPHQ6ULP2 937 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 GOLGA7Q7Z5G4 137 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ENTHD1Q8IYW4 607 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 C10orf111Q8N326 155 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 PAF1Q8N7H5 531 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 CDKN2AIPNLQ96HQ2 116 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 CEP295NLQ96MC4 621 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 CDK15Q96Q40 435 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms