RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ATP6V1HQ9UI12 483 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ZNF99A8MXY4 864 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 AP3D1O14617 1153 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CHRNA1P02708 482 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 EIF2S1P05198 315 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 ZNF12P17014 697 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MAPK9P45984 424 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ALDH3A2P51648 485 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CARD16Q5EG05 197 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 NXPE1Q8N323 547 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 C1orf52Q8N6N3 182 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 GTPBP3Q969Y2 492 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 C1GALT1C1Q96EU7 318 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MUS81Q96NY9 551 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 RPF2Q9H7B2 306 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 INTS7Q9NVH2 962 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 AIG1Q9NVV5 245 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MYADML2A6NDP7 307 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TMEM88BA6NKF7 163 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 J3QRK9 145 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SNPHO15079 494 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CREG1O75629 220 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 OAZ2O95190 189 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SNAP29O95721 258 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 GALTP07902 379 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ALOX5P09917 674 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 EBLN1P0CF75 366 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ZNF10P21506 573 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 FDXRP22570 491 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MAPK12P53778 367 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 GRIK2Q13002 908 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CBX2Q14781 532 aaPredicted RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 BLOC1S3Q6QNY0 202 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ARHGAP12Q8IWW6 846 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 FBXL8Q96CD0 374 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 RANBP9Q96S59 729 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SSR3Q9UNL2 185 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PLK4O00444 970 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 DFNA5O60443 496 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 STX11O75558 287 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 DIRAS1O95057 198 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ADH1CP00326 375 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 C8BP07358 591 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 ACADMP11310 421 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 NPTX1Q15818 432 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CTC1Q2NKJ3 1217 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PDCD4Q53EL6 469 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 CEP78Q5JTW2 689 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MFSD4BQ5TF39 518 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 Q6ZVU0 165 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 RBM23Q86U06 439 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 MINDY1Q8N5J2 469 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 OR52B6Q8NGF0 335 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 TRIB2Q92519 343 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 LRCH3Q96II8 777 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 SMURF2Q9HAU4 748 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 PREBQ9HCU5 417 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 GTF2A1LQ9UNN4 478 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 MRPS7Q9Y2R9 242 aaKnown RBP7.04□□□□□ -1.28
VCAN-202ENST00000342785 ASB3Q9Y575 518 aa7.04□□□□□ -1.28
VCAN-202ENST00000342785 CENPXA8MT69 81 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 TP73O15350 636 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 DENRO43583 198 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 PGLSO95336 258 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 OPN1SWP03999 348 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 ANXA8P13928 327 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 IL7RP16871 459 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 ENGP17813 658 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 KCNA5P22460 613 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 FMO3P31513 532 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 GKP32189 559 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 GATMP50440 423 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 OR4D2P58180 307 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CARTPTQ16568 116 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 MYLK3Q32MK0 819 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PLEKHG6Q3KR16 790 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CAPNS2Q96L46 248 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 EFCAB11Q9BUY7 163 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 RIOK2Q9BVS4 552 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 COQ6Q9Y2Z9 468 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 COL18A1P39060 1754 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 MYH14Q7Z406 1995 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 TFECO14948 347 aaPredicted RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 PI15O43692 258 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 BMP7P18075 431 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PSMA1P25786 263 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 ENTPD1P49961 510 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 GALNT1Q10472 559 aaPredicted RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 GNA13Q14344 377 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 DSC3Q14574 896 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 Q6ZVL8 140 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 RGL4Q8IZJ4 473 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CAMKK1Q8N5S9 505 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 CAPSLQ8WWF8 208 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 SMG7Q92540 1137 aaKnown RBP7.03□□□□□ -1.28
VCAN-202ENST00000342785 CXorf40BQ96DE9 158 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 DEPDC7Q96QD5 511 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 OR2AG1Q9H205 316 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 TPT1P8Q9HAU6 139 aa7.03□□□□□ -1.28
VCAN-202ENST00000342785 PTGFRNQ9P2B2 879 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms