RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC22A18Q96BI1 424 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 GPR21Q99679 349 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 WDR83Q9BRX9 315 aaKnown RBP18.59■□□□□ 0.57
SYNE4-202ENST00000340477 RARRES3Q9UL19 164 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 DHRS7Q9Y394 339 aa18.59■□□□□ 0.57
SYNE4-202ENST00000340477 ISM1B1AKI9 464 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.58■□□□□ 0.56
SYNE4-202ENST00000340477 EIF3FO00303 357 aaPredicted RBP18.58■□□□□ 0.56
SYNE4-202ENST00000340477 RASGRF2O14827 1237 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 C1orf105O95561 183 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 MAP4P27816 1152 aaKnown RBP18.58■□□□□ 0.56
SYNE4-202ENST00000340477 BDKRB1P46663 353 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 SH3BP2P78314 561 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 TLE3Q04726 772 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 CBLBQ13191 982 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 CLN3Q13286 438 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 GBX1Q14549 363 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 KLHL38Q2WGJ6 581 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 ACSBG2Q5FVE4 666 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 TEDDM1Q5T9Z0 273 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 TRMT10BQ6PF06 316 aaKnown RBP18.58■□□□□ 0.56
SYNE4-202ENST00000340477 C19orf48Q6RUI8 117 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 CAPN12Q6ZSI9 719 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 BPHLQ86WA6 291 aaPredicted RBP18.58■□□□□ 0.56
SYNE4-202ENST00000340477 D2HGDHQ8N465 521 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 MMGT1Q8N4V1 131 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 GPATCH11Q8N954 259 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 PMEPA1Q969W9 287 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 NDNQ99608 321 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 APMAPQ9HDC9 416 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 SPATA7Q9P0W8 599 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 TXNDC16Q9P2K2 825 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 LNPEPQ9UIQ6 1025 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 BTRCQ9Y297 605 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 NFS1Q9Y697 457 aa18.58■□□□□ 0.56
SYNE4-202ENST00000340477 SDK2Q58EX2 2172 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 PABPN1LA6NDY0 278 aaKnown RBP18.57■□□□□ 0.56
SYNE4-202ENST00000340477 SLC9B1P1A6NJY1 282 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 ZNF839A8K0R7 811 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 GSTA2P09210 222 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 EBLN1P0CF75 366 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 MPC1LP0DKB6 136 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 UGT2B7P16662 529 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 ITPKBP27987 946 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 SLC7A5Q01650 507 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 GUCY2DQ02846 1103 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 PDAP1Q13442 181 aaKnown RBP18.57■□□□□ 0.56
SYNE4-202ENST00000340477 CUL1Q13616 776 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 COL28A1Q2UY09 1125 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 MANEAQ5SRI9 462 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 FAM45BPQ6NSW5 357 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 SLC26A11Q86WA9 606 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 IL22RA1Q8N6P7 574 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 OR2L8Q8NGY9 312 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 OR8K5Q8NH50 307 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 FAM45AQ8TCE6 357 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 FBXO25Q8TCJ0 367 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 CD200R1Q8TD46 325 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 N4BP2L2Q92802 583 aaPredicted RBP18.57■□□□□ 0.56
SYNE4-202ENST00000340477 ELMO2Q96JJ3 720 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 LRRC1Q9BTT6 524 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 PITPNM3Q9BZ71 974 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 ULBP3Q9BZM4 244 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 SYTL2Q9HCH5 934 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 FGF21Q9NSA1 209 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 GALPQ9UBC7 116 aa18.57■□□□□ 0.56
SYNE4-202ENST00000340477 MTRF1LQ9UGC7 380 aaKnown RBP18.57■□□□□ 0.56
SYNE4-202ENST00000340477 RUVBL2Q9Y230 463 aaKnown RBP18.57■□□□□ 0.56
SYNE4-202ENST00000340477 AHCTF1Q8WYP5 2266 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 A0A0J9YY10 115 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 MATN4O95460 622 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 AHSGP02765 367 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 FGF5P12034 268 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 CD9P21926 228 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 TUBB4BP68371 445 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 KCNAB1Q14722 419 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 SLC5A12Q1EHB4 618 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
SYNE4-202ENST00000340477 GLE1Q53GS7 698 aaKnown RBP18.56■□□□□ 0.56
SYNE4-202ENST00000340477 STRA8Q7Z7C7 330 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 CPNE9Q8IYJ1 553 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 MYO1HQ8N1T3 1032 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 GIMAP7Q8NHV1 300 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 CCNL2Q96S94 520 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-202ENST00000340477 FAM129AQ9BZQ8 928 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 PLAC1Q9HBJ0 212 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 INTS7Q9NVH2 962 aaKnown RBP18.56■□□□□ 0.56
SYNE4-202ENST00000340477 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.56■□□□□ 0.56
SYNE4-202ENST00000340477 SLC17A6Q9P2U8 582 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 CIDEBQ9UHD4 219 aa18.56■□□□□ 0.56
SYNE4-202ENST00000340477 ESYT3A0FGR9 886 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 RAD1O60671 282 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 STK17BO94768 372 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 FOLR1P15328 257 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 ST6GAL1P15907 406 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 MCM3P25205 808 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 FBXO38Q6PIJ6 1188 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 CCDC81Q6ZN84 652 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 TAX1BP1Q86VP1 789 aa18.55■□□□□ 0.56
SYNE4-202ENST00000340477 CACNA2D3Q8IZS8 1091 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms