RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TFB2MQ9H5Q4 396 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
LIN54-201ENST00000340417 BLOC1S6Q9UL45 172 aa12.54□□□□□ -0.4
LIN54-201ENST00000340417 LATO43561 262 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 GRIA1P42261 906 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 CASP12Q6UXS9 341 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 FAM13CQ8NE31 585 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 UGT2B28Q9BY64 529 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 RRP15Q9Y3B9 282 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 ZNF487B1APH4 448 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 CDC7O00311 574 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 TOP3BO95985 862 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 MPIP34949 423 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 SPINT3P49223 89 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 PER3P56645 1201 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 LRRC74BQ6ZQY2 392 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 TMC8Q8IU68 726 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 UTP15Q8TED0 518 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 SLC5A11Q8WWX8 675 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 ADAP2Q9NPF8 381 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 POLR1CO15160 346 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 KIR3DL1P43629 444 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 RAB28P51157 221 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 GTF2A1P52655 376 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 RAB8AP61006 207 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 RALGDSQ12967 914 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 WLSQ5T9L3 541 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 C1orf189Q5VU69 101 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 GPR151Q8TDV0 419 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 PGM2Q96G03 612 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 TBL1XR1Q9BZK7 514 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 KLRF1Q9NZS2 232 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 PHF11Q9UIL8 331 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 A0A1B0GUL6 1792 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 CAPN1P07384 714 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 UROSP10746 265 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 NQO1P15559 274 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 HLA-FP30511 346 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 SP140Q13342 867 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 OLIG2Q13516 323 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 SCML4Q8N228 414 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 OXNAD1Q96HP4 312 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 PISDQ9UG56 409 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 HDAC3O15379 428 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 MPSTP25325 297 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 ACRV1P26436 265 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 HOXD9P28356 352 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 HK2P52789 917 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 C1DQ13901 141 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 AGTRAPQ6RW13 159 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 LRRC70Q7Z2Q7 622 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
LIN54-201ENST00000340417 ISG20Q96AZ6 181 aaKnown RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 PGAP3Q96FM1 320 aaPredicted RBP12.53□□□□□ -0.4
LIN54-201ENST00000340417 PDPK1O15530 556 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 PAICSP22234 425 aaKnown RBP12.52□□□□□ -0.4
LIN54-201ENST00000340417 ADAM15Q13444 863 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 SPATA19Q7Z5L4 167 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 TSPAN33Q86UF1 283 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 TWIST2Q8WVJ9 160 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.4
LIN54-201ENST00000340417 SLC22A3O75751 556 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 NCBP2P52298 156 aaKnown RBP eCLIP12.52□□□□□ -0.416e-6■■■■□ 20.8
LIN54-201ENST00000340417 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 OR4K17Q8NGC6 315 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 METTL7AQ9H8H3 244 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 TMEM27Q9HBJ8 222 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 MBTPS2O43462 519 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 GSNP06396 782 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 SNRPB2P08579 225 aaKnown RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 MYCLP1P12525 358 aaPredicted RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 CALB2P22676 271 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 TAS2R41P59536 307 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 DPYSQ14117 519 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 PARS2Q7L3T8 475 aaKnown RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 SCRN2Q96FV2 425 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 TMEM74Q96NL1 305 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 SNX13Q9Y5W8 968 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 CRHR1P34998 444 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 GRIA3P42263 894 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 TRIP10Q15642 601 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 IYDQ6PHW0 289 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 ZYG11AQ6WRX3 759 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 ST13P4Q8IZP2 240 aaPredicted RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 AENQ8WTP8 325 aaKnown RBP12.52□□□□□ -0.41
LIN54-201ENST00000340417 SLC22A12Q96S37 553 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 FNDC11Q9BVV2 318 aa12.52□□□□□ -0.41
LIN54-201ENST00000340417 ACSS2Q9NR19 701 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms