RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 SERPINB4P48594 390 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 PDK4Q16654 411 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 DCUN1D3Q8IWE4 304 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 FBXO39Q8N4B4 442 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 RAB42Q8N4Z0 105 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 EID2Q8N6I1 236 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 OR9A1PQ8NGU1 263 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 SLC37A2Q8TED4 501 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 CAMK1GQ96NX5 476 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 PKP4Q99569 1192 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 NLGN3Q9NZ94 848 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 COPG2Q9UBF2 871 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 MID2Q9UJV3 735 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 PLAGL1Q9UM63 463 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 PCDH15Q96QU1 1955 aa14.35□□□□□ -0.11
CSRP1-201ENST00000340006 GOLGA4Q13439 2230 aaKnown RBP14.35□□□□□ -0.11
CSRP1-201ENST00000340006 KRT87PA6NCN2 255 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 SBK3P0C264 359 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 PPM1FP49593 454 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 MAZP56270 477 aaKnown RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 AP1S2P56377 157 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 HHEXQ03014 270 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 TSTA3Q13630 321 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 PLCL1Q15111 1095 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 PPP1R3AQ16821 1122 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 C6orf132Q5T0Z8 1188 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 MBOAT1Q6ZNC8 495 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 RAB44Q7Z6P3 723 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 RDH11Q8TC12 318 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 SREK1Q8WXA9 508 aaKnown RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 MECRQ9BV79 373 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 EPN3Q9H201 632 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 SLC40A1Q9NP59 571 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 ABCF3Q9NUQ8 709 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 GPR179Q6PRD1 2367 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 GMNCA6NCL1 334 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 TARM1B6A8C7 271 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 DLX3O60479 287 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 ATP5F1P24539 256 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 CSRP2Q16527 193 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 FBXO48Q5FWF7 155 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 SULT1C3Q6IMI6 304 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 OGFOD3Q6PK18 319 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 NUDCD3Q8IVD9 361 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 C2orf73Q8N5S3 287 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 FBXO15Q8NCQ5 510 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 OR4E2Q8NGC2 313 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 LCN9Q8WX39 176 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 CCDC126Q96EE4 140 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 CHMP6Q96FZ7 201 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 ZNF317Q96PQ6 595 aaPredicted RBP14.34□□□□□ -0.11
CSRP1-201ENST00000340006 ATG10Q9H0Y0 220 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 NUDT4Q9NZJ9 180 aa14.34□□□□□ -0.11
CSRP1-201ENST00000340006 SRRM3A6NNA2 597 aaPredicted RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 RHPN2P1A8MT19 583 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 TCP11X1B4DZS4 312 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 G3V2L1 256 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 PCDHGA12O60330 932 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 SLC16A8O95907 504 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 MTHFD2P13995 350 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 HNMTP50135 292 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 AASDHQ4L235 1098 aaPredicted RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ZCCHC8Q6NZY4 707 aaKnown RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ZYG11AQ6WRX3 759 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 SLC22A9Q8IVM8 553 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 C10orf107Q8IVU9 208 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 AVL9Q8NBF6 648 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 PPP1R14CQ8TAE6 165 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 LRRC8CQ8TDW0 803 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 SETD7Q8WTS6 366 aaKnown RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ATL1Q8WXF7 558 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 JPH3Q8WXH2 748 aaPredicted RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ESAMQ96AP7 390 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 MED8Q96G25 268 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 POT1Q9NUX5 634 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 WWOXQ9NZC7 414 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 TMCO1Q9UM00 188 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ARID1BQ8NFD5 2236 aaPredicted RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 MUC6Q6W4X9 2439 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 TRIM38O00635 465 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 PPM1DO15297 605 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 NOBOXO60393 691 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 LRP3O75074 770 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 IPO13O94829 963 aaKnown RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 BPGMP07738 259 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 VIMP08670 466 aaKnown RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 GIMD1P0DJR0 217 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ALDH3A1P30838 453 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ALDH18A1P54886 795 aaKnown RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 GPR18Q14330 331 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 KANSL1Q7Z3B3 1105 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 RASGRP3Q8IV61 690 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 ARL10Q8N8L6 244 aa14.33□□□□□ -0.12
CSRP1-201ENST00000340006 PTGR2Q8N8N7 351 aaPredicted RBP14.33□□□□□ -0.12
CSRP1-201ENST00000340006 PPFIBP2Q8ND30 876 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms