RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 OR56B2PQ8NGI1 322 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 THEM6Q8WUY1 208 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 SEC61A2Q9H9S3 476 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 FZD3Q9NPG1 666 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 HMGXB4Q9UGU5 601 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 SUPT20HL2P0C7V6 817 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 FBXO48Q5FWF7 155 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 NCCRP1Q6ZVX7 275 aaPredicted RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 ATAD1Q8NBU5 361 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 ADAD1Q96M93 576 aaKnown RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 COPS8Q99627 209 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 POT1Q9NUX5 634 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 GLS2Q9UI32 602 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 A0A1W2PPM1 405 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 EIF1AYO14602 144 aaKnown RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 SEC13P55735 322 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 GRIK2Q13002 908 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 PHF19Q5T6S3 580 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 NXPE1Q8N323 547 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 METTL25Q8N6Q8 603 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 OR10Q1Q8NGQ4 319 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 C15orf40Q8WUR7 153 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 IL4I1Q96RQ9 567 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 PREBQ9HCU5 417 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 SIRPGQ9P1W8 387 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 SLC35F4A4IF30 521 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 J3QLW9 94 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 TPPPO94811 219 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 ZNF19P17023 458 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 CCNOP22674 350 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 RASGRP3Q8IV61 690 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 TRMT2AQ8IZ69 625 aaKnown RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 NEDD4LQ96PU5 975 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 SCP2D1Q9UJQ7 156 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 MAP1BP46821 2468 aaKnown RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 RAB36O95755 333 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 IL23RQ5VWK5 629 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 FIP1L1Q6UN15 594 aaKnown RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 RBM18Q96H35 190 aaKnown RBP12.62□□□□□ -0.39
USP47-202ENST00000339865 TM9SF2Q99805 663 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 WDR45Q9Y484 360 aa12.62□□□□□ -0.39
USP47-202ENST00000339865 RAB3BP20337 219 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 COL28A1Q2UY09 1125 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 DNAJB3Q8WWF6 145 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 KCNS2Q9ULS6 477 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 DOCK9Q9BZ29 2069 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 H7C417 338 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 LIASO43766 372 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
USP47-202ENST00000339865 PTGR1Q14914 329 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PHYKPLQ8IUZ5 450 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 TOR1AIP2Q8NFQ8 470 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 CD93Q9NPY3 652 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 FBXW2Q9UKT8 454 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 CHD5Q8TDI0 1954 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 REREQ9P2R6 1566 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 RBM47A0AV96 593 aaKnown RBP12.61□□□□□ -0.39
USP47-202ENST00000339865 ZNF726A6NNF4 738 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 RAD51DO75771 328 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 CLDN9O95484 217 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 MAGEB1P43366 347 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 YIPF7Q8N8F6 280 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PLEKHA3Q9HB20 300 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 HCN3Q9P1Z3 774 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 CMAHPQ9Y471 501 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 A0A0G2JMP0 313 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 DNAJA2O60884 412 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 IFNA17P01571 189 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 JUNP05412 331 aaKnown RBP12.61□□□□□ -0.39
USP47-202ENST00000339865 GOT1P17174 413 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 HTR2BP41595 481 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 ECH1Q13011 328 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 COX18Q8N8Q8 333 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 OR4M2Q8NGB6 313 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 FAM83DQ9H4H8 585 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PCDHGC3Q9UN70 934 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 VWA7Q9Y334 891 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 ZNF175Q9Y473 711 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 INPPL1O15357 1258 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PROM1O43490 865 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 ANXA3P12429 323 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 NPTX1Q15818 432 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 ZC3H12AQ5D1E8 599 aaKnown RBP12.61□□□□□ -0.39
USP47-202ENST00000339865 EBNA1BP2Q99848 306 aaKnown RBP12.61□□□□□ -0.39
USP47-202ENST00000339865 HERC2P3Q9BVR0 1158 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 ANKRD33BA6NCL7 494 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 SIGLEC16A6NMB1 481 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 VILLO15195 856 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PSMD10O75832 226 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 RHOP08100 348 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms