RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MIB1Q86YT6 1006 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 YAF2Q8IY57 180 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 CBARPQ8N350 705 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 RYBPQ8N488 228 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 CSGALNACT1Q8TDX6 532 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 GIPC2Q8TF65 315 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 EXT2Q93063 718 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 ISOC1Q96CN7 298 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 LINGO1Q96FE5 620 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 AURKBQ96GD4 344 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 MSANTD3Q96H12 275 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 MAGEB10Q96LZ2 347 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 KCNA7Q96RP8 456 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 CGREF1Q99674 301 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 FEM1AQ9BSK4 669 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 IER2Q9BTL4 223 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 NPLQ9BXD5 320 aaPredicted RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 UGT2B28Q9BY64 529 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RPF2Q9H7B2 306 aaKnown RBP10.56□□□□□ -0.72
RTN3-201ENST00000338850 LMAN1LQ9HAT1 526 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 SMPD4Q9NXE4 827 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 OBP2AQ9NY56 170 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 IL17CQ9P0M4 197 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 IKZF3Q9UKT9 509 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 AURKCQ9UQB9 309 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 OARD1Q9Y530 152 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 RAI2Q9Y5P3 530 aa10.56□□□□□ -0.72
RTN3-201ENST00000338850 TICRRQ7Z2Z1 1910 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 PLXNB3Q9ULL4 1909 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 LRRC14BA6NHZ5 514 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 GFRA2O00451 464 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 PLOD2O00469 737 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 EI24O14681 340 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 LSM1O15116 133 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 INPP4BO15327 924 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 SYNCRIPO60506 623 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 SCELO95171 688 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 S100BP04271 92 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 RETP07949 1114 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 CBSLP0DN79 551 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 CHRNB1P11230 501 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 HMGA1P17096 107 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 ZNF7P17097 686 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 TSPAN8P19075 237 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 HMOX2P30519 316 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 CBSP35520 551 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 SOX9P48436 509 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 HK3P52790 923 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 TMBIM6P55061 237 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 FOXK2Q01167 660 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 TRAF3Q13114 568 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 ZNF177Q13360 481 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 TOP3AQ13472 1001 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 DAG1Q14118 895 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 GAS6Q14393 721 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 RBBP7Q16576 425 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 PLA2G4EQ3MJ16 856 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 GGTA1PQ4G0N0 100 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 FAM98BQ52LJ0 330 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 ZC3H12BQ5HYM0 836 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 HECTD3Q5T447 861 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 SDHAF4Q5VUM1 108 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 TTC23Q5W5X9 447 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 IL31Q6EBC2 164 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 SULT1C3Q6IMI6 304 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 PSAPL1Q6NUJ1 521 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 SBSNQ6UWP8 590 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 TMEM150AQ86TG1 271 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 OR7D4Q8NG98 312 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 OR2T11Q8NH01 316 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 HDAC2Q92769 488 aaKnown RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 BIRC7Q96CA5 298 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 RMDN1Q96DB5 314 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 ZFYVE19Q96K21 471 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 NTMT1Q9BV86 223 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 SLC46A2Q9BY10 475 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 FAM126AQ9BYI3 521 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 ACTL8Q9H568 366 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 C8orf33Q9H7E9 229 aaPredicted RBP10.55□□□□□ -0.72
RTN3-201ENST00000338850 LHX3Q9UBR4 397 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 GNPTGQ9UJJ9 305 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 BTRCQ9Y297 605 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 MAN2B2Q9Y2E5 1009 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 CCL27Q9Y4X3 112 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 NEUROG3Q9Y4Z2 214 aa10.55□□□□□ -0.72
RTN3-201ENST00000338850 TRBV5-3A0A0A0MS03 114 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 A0A0D9SEW6 157 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 MYOCOSA0A1B0GUC4 107 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 SH3PXD2BA1X283 911 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 AGAP14A8MT82 685 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 FAM220BPB1ANY3 271 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 E5RI56 91 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 UPK1AO00322 258 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 RGS14O43566 566 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 MRPS14O60783 128 aaKnown RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 SOCS5O75159 536 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms