RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FAM189A1O60320 539 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 RLN1P04808 185 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 EPHX1P07099 455 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 MNDAP41218 407 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PLA2G16P53816 162 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 CRTC2Q53ET0 693 aaPredicted RBP13.48□□□□□ -0.25
RTN4-202ENST00000337526 WDTC1Q8N5D0 677 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PIK3R3Q92569 461 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 FIZ1Q96SL8 496 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PTPN18Q99952 460 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 KCNS3Q9BQ31 491 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 TRPV5Q9NQA5 729 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 SNTG1Q9NSN8 517 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PTBP2Q9UKA9 531 aaKnown RBP13.48□□□□□ -0.25
RTN4-202ENST00000337526 IKZF2Q9UKS7 526 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 MAN2B2Q9Y2E5 1009 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 TELO2Q9Y4R8 837 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 CNTRLQ7Z7A1 2325 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 ANKRD66B4E2M5 251 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 CCL16O15467 120 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PGRP06401 933 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 HNMTP50135 292 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PRR5P85299 388 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 OR2T5Q6IEZ7 315 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 LYSMD3Q7Z3D4 306 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 OR10G2Q8NGC3 310 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 OR2T29Q8NH02 315 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 C2orf15Q8WU43 125 aaKnown RBP13.48□□□□□ -0.25
RTN4-202ENST00000337526 SMOC2Q9H3U7 446 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 GIMAP2Q9UG22 337 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 LTN1O94822 1766 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 ZNF487B1APH4 448 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 PCDH7O60245 1069 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 ATP6V1G1O75348 118 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 ALPIP09923 528 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 DNAJA1P31689 397 aaKnown RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 TARDBPQ13148 414 aaKnown RBP eCLIP13.47□□□□□ -0.253e-9■■■■■ 47
RTN4-202ENST00000337526 IQCCQ4KMZ1 466 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 ATP13A5Q4VNC0 1218 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 FAM124AQ86V42 546 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 TXNDC5Q8NBS9 432 aaKnown RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 BIRC7Q96CA5 298 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 TMCO6Q96DC7 493 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CEP295NLQ96MC4 621 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 SLC32A1Q9H598 525 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 TBC1D17Q9HA65 648 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 PRKAB1Q9Y478 270 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 PMF1-BGLAPU3KQ54 211 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 KCPQ6ZWJ8 1503 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 A0A1W2PRB8 838 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 GLTPD2A6NH11 291 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CCNDBP1O95273 360 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 RYKP34925 604 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 WASP42768 502 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 TUBA4AP68366 448 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 FRG2Q64ET8 278 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 RPTNQ6XPR3 784 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 OR4F6Q8NGB9 312 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 PIGXQ8TBF5 258 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 FRG2BQ96QU4 278 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CCSER2Q9H7U1 834 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 NFKBIL1Q9UBC1 381 aaPredicted RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 IQCMA0A1B0GVH7 501 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 FABP12A6NFH5 140 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 J3QRK9 145 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 G6PDP11413 515 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 ENGP17813 658 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 STARP49675 285 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 KCNQ1P51787 676 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 SIX1Q15475 284 aaPredicted RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 DEFB115Q30KQ5 88 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 LCN1P1Q5VSP4 162 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 XKR5Q6UX68 686 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CLIP4Q8N3C7 705 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 FBXL8Q96CD0 374 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CCDC106Q9BWC9 280 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 ELL3Q9HB65 397 aaPredicted RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 ABCB8Q9NUT2 735 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 TGFBR2P37173 567 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CSKP41240 450 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 GDF5P43026 501 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 STC1P52823 247 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 PRR23BQ6ZRT6 265 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 USP43Q70EL4 1123 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.47□□□□□ -0.25
RTN4-202ENST00000337526 TP53INP1Q96A56 240 aa13.47□□□□□ -0.25
RTN4-202ENST00000337526 ZBED6CLQ96FA7 236 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms