RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PPP3CCP48454 512 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 C16orf72Q14CZ0 275 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 OR4F3Q6IEY1 312 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 CRTC3Q6UUV7 619 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TSPAN14Q8NG11 270 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 NSMCE2Q96MF7 247 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 ACAT2Q9BWD1 397 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PARVBQ9HBI1 364 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 OLAHQ9NV23 265 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 ANAPC2Q9UJX6 822 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PLAGL1Q9UM63 463 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PPT2Q9UMR5 302 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PRR23AA6NEV1 266 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 SOCS5O75159 536 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TNFAIP8O95379 198 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PGRP06401 933 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 ATP1B2P14415 290 aaPredicted RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 POLR2EP19388 210 aaKnown RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 CD22P20273 847 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 GNPDA1P46926 289 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 EMX2Q04743 252 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 CHIT1Q13231 466 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 NAE1Q13564 534 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TMEM259Q4ZIN3 620 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PDCD4Q53EL6 469 aaKnown RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 NHSL2Q5HYW2 709 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 LCN8Q6JVE9 175 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 DOK6Q6PKX4 331 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 HACD2Q6Y1H2 254 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 MACC1Q6ZN28 852 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 STK32CQ86UX6 486 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 HID1Q8IV36 788 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 PARP8Q8N3A8 854 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 LMLNQ96KR4 655 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TOX2Q96NM4 488 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 ADI1Q9BV57 179 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TMEM121BQ9BXQ6 578 aaPredicted RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 TRIM54Q9BYV2 358 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 FAM83DQ9H4H8 585 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 C11orf49Q9H6J7 331 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 INVSQ9Y283 1065 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 TNPO3Q9Y5L0 923 aaKnown RBP8.63□□□□□ -1.03
SNCA-201ENST00000336904 PLXNB3Q9ULL4 1909 aa8.63□□□□□ -1.03
SNCA-201ENST00000336904 hCG_2014768A0A024R1R8 64 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 RGS14O43566 566 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 VPS4BO75351 444 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CLDN9O95484 217 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CPSF4O95639 269 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 POP4O95707 220 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 OR56A5P0C7T3 313 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 POLR2IP36954 125 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 GSSP48637 474 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 LRRC23Q53EV4 343 aaPredicted RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 ARMC3Q5W041 872 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 FAM217AQ8IXS0 508 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CLECL1Q8IZS7 167 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CATSPER1Q8NEC5 780 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 OR2T12Q8NG77 320 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 GTF2H4Q92759 462 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ZNF583Q96ND8 569 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 MRPL40Q9NQ50 206 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 KCTD5Q9NXV2 234 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ERVW-1Q9UQF0 538 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 SH2B3Q9UQQ2 575 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 EIF3LQ9Y262 564 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 HS3ST2Q9Y278 367 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PCDHB14Q9Y5E9 798 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ST14Q9Y5Y6 855 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 DENND4CQ5VZ89 1909 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PABPN1LA6NDY0 278 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 ACOX3O15254 700 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 KIF1CO43896 1103 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 MAN1A2O60476 641 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PRKD3O94806 890 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 KCNH1O95259 989 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ETHE1O95571 254 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 STATHP02808 62 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 NTRK1P04629 796 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 MSH3P20585 1137 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 NR4A1P22736 598 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PSMA3P25788 255 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 AOAHP28039 575 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CCT8P50990 548 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TTLL9Q3SXZ7 439 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CYP27C1Q4G0S4 372 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 SYTL3Q4VX76 610 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 XKR6Q5GH73 641 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 SULT1C3Q6IMI6 304 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TTC33Q6PID6 262 aaPredicted RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CARM1Q86X55 608 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 RASGEF1AQ8N9B8 481 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TRPV3Q8NET8 790 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 FAM162AQ96A26 154 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 HIST1H2AHQ96KK5 128 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 HIST1H2AJQ99878 128 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 DCUN1D5Q9BTE7 237 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms