RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 COPEO14579 308 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 CASC3O15234 703 aaKnown RBP16.99■□□□□ 0.31
CHGA-202ENST00000334654 OPA1O60313 960 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 KERAO60938 352 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 GLRA3O75311 464 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 ERGP11308 486 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 CYP2A7P20853 494 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 CCT5P48643 541 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 CDKL1Q00532 357 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 MPP2Q14168 576 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 KRT33BQ14525 404 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
CHGA-202ENST00000334654 KLC3Q6P597 504 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 GPSM1Q86YR5 675 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 MAGEC3Q8TD91 643 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 ALKBH8Q96BT7 664 aaKnown RBP16.99■□□□□ 0.31
CHGA-202ENST00000334654 ATP6V1G3Q96LB4 118 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 IL17FQ96PD4 163 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 SMC6Q96SB8 1091 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 MRPL57Q9BQC6 102 aaKnown RBP16.99■□□□□ 0.31
CHGA-202ENST00000334654 TBC1D10AQ9BXI6 508 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 XKR8Q9H6D3 395 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 SSU72Q9NP77 194 aaKnown RBP16.99■□□□□ 0.31
CHGA-202ENST00000334654 NCKIPSDQ9NZQ3 722 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 GRID1Q9ULK0 1009 aa16.99■□□□□ 0.31
CHGA-202ENST00000334654 SNRNP200O75643 2136 aaKnown RBP16.98■□□□□ 0.31
CHGA-202ENST00000334654 TK2O00142 265 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 B4GAT1O43505 415 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 PLIN3O60664 434 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 SLC16A8O95907 504 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 PROCP04070 461 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 RBP1P09455 135 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 PNLIPP16233 465 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 CKMT2P17540 419 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 AP1S2P56377 157 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 MAGOHP61326 146 aaKnown RBP16.98■□□□□ 0.31
CHGA-202ENST00000334654 TTC23LQ6PF05 361 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 LRRC56Q8IYG6 542 aaPredicted RBP16.98■□□□□ 0.31
CHGA-202ENST00000334654 LINC01555Q8NAE3 123 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 OR6C4Q8NGE1 309 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 ZNF480Q8WV37 535 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 CCDC74AQ96AQ1 378 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 SH3KBP1Q96B97 665 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 STMN4Q9H169 189 aaPredicted RBP16.98■□□□□ 0.31
CHGA-202ENST00000334654 MRPL46Q9H2W6 279 aaKnown RBP16.98■□□□□ 0.31
CHGA-202ENST00000334654 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 XPR1Q9UBH6 696 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 RNF112Q9ULX5 631 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 PLLPQ9Y342 182 aa16.98■□□□□ 0.31
CHGA-202ENST00000334654 CNOT1A5YKK6 2376 aaKnown RBP16.97■□□□□ 0.31
CHGA-202ENST00000334654 CPED1A4D0V7 1026 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 RHPN2P1A8MT19 583 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 UBXN8O00124 270 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 KLK8O60259 260 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 GUCA1CO95843 209 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 ACP1P24666 158 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 MAP4P27816 1152 aaKnown RBP16.97■□□□□ 0.31
CHGA-202ENST00000334654 IMPA1P29218 277 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 PKLRP30613 574 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 GPR3P46089 330 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 GPS2Q13227 327 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 CYP2A13Q16696 494 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 ADGRF3Q8IZF5 1079 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 OR4E2Q8NGC2 313 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 TCP10LQ8TDR4 215 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 LCN9Q8WX39 176 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 RHBDF1Q96CC6 855 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 SCYL1Q96KG9 808 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.97■□□□□ 0.31
CHGA-202ENST00000334654 STN1Q9H668 368 aaKnown RBP16.97■□□□□ 0.31
CHGA-202ENST00000334654 ARL15Q9NXU5 204 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 STOX2Q9P2F5 926 aaPredicted RBP16.97■□□□□ 0.31
CHGA-202ENST00000334654 CPSF2Q9P2I0 782 aaKnown RBP16.97■□□□□ 0.31
CHGA-202ENST00000334654 SLC17A7Q9P2U7 560 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 FTSJ1Q9UET6 329 aa16.97■□□□□ 0.31
CHGA-202ENST00000334654 IGHV1OR21-1A0A087WYE8 117 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 BTN3A3O00478 584 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 TAPBPO15533 448 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 HIST1H2AGP0C0S8 130 aaPredicted RBP16.96■□□□□ 0.31
CHGA-202ENST00000334654 HIST1H2ADP20671 130 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 RPA3P35244 121 aaPredicted RBP16.96■□□□□ 0.31
CHGA-202ENST00000334654 RAB28P51157 221 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 DUSP3P51452 185 aaPredicted RBP16.96■□□□□ 0.31
CHGA-202ENST00000334654 OR1D5P58170 312 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 DAB2P98082 770 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 FASTKQ14296 549 aaKnown RBP16.96■□□□□ 0.31
CHGA-202ENST00000334654 C18orf21Q32NC0 220 aaPredicted RBP16.96■□□□□ 0.31
CHGA-202ENST00000334654 CDKL4Q5MAI5 379 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 EFL1Q7Z2Z2 1120 aaKnown RBP16.96■□□□□ 0.31
CHGA-202ENST00000334654 SPRED1Q7Z699 444 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 PDPRQ8NCN5 879 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 HMGCLL1Q8TB92 370 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 NETO1Q8TDF5 533 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 HIST1H2AHQ96KK5 128 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 TSNARE1Q96NA8 513 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 SLC38A3Q99624 504 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 HIST1H2AJQ99878 128 aa16.96■□□□□ 0.31
CHGA-202ENST00000334654 H2AFJQ9BTM1 129 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms