RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 NTRK1P04629 796 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ABCB1P08183 1280 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PKMP14618 531 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ADSLP30566 484 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ARF5P84085 180 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 OR52E8Q6IFG1 317 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 NCEH1Q6PIU2 408 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ZYG11AQ6WRX3 759 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 STAG3L4Q8TBR4 150 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 C19orf60Q96EN9 201 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 NUAK2Q9H093 628 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PCDH12Q9NPG4 1184 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 CCDC162PA2VCL2 907 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 PAK4O96013 591 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 SERPIND1P05546 499 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 CYP2A7P20853 494 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MRPS21P82921 87 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 BNIP2Q12982 314 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 KIAA0930Q6ICG6 404 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 CAND1Q86VP6 1230 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 GPSM1Q86YR5 675 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ERI1Q8IV48 349 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 PLD6Q8N2A8 252 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ZFP28Q8NHY6 868 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 WFDC5Q8TCV5 224 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ITFG2Q969R8 447 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ESAMQ96AP7 390 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 SIGLEC10Q96LC7 697 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 TDRD1Q9BXT4 1180 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 TPSD1Q9BZJ3 242 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 FBRSQ9HAH7 460 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 KLQ9UEF7 1012 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ZDHHC2Q9UIJ5 367 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 OAZ3Q9UMX2 235 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 COPG1Q9Y678 874 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MATN2O00339 956 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MAGEB3O15480 346 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 RPN2P04844 631 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MTHFD1P11586 935 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 C5AR1P21730 350 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 PCLAFQ15004 111 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MAPKAPK3Q16644 382 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 CXorf57Q6NSI4 855 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ZNF621Q6ZSS3 439 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 GALNT5Q7Z7M9 940 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ADHFE1Q8IWW8 467 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 NKAPQ8N5F7 415 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 DNASE1L2Q92874 299 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ISG20Q96AZ6 181 aaKnown RBP11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MRGPRX2Q96LB1 330 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 DEPDC7Q96QD5 511 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 MGME1Q9BQP7 344 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 RASSF1Q9NS23 344 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 OR2AG2A6NM03 316 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 BOLA2-SMG1P6H3BVE0 249 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 KCNH1O95259 989 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 SRFP11831 508 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 GNSP15586 552 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 PRDX6P30041 224 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 HOXC13P31276 330 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 LSAMPQ13449 338 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 CCNIQ14094 377 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 TEAD4Q15561 434 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 TAZQ16635 292 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 GLYATQ6IB77 296 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 CCDC80Q76M96 950 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 ARMCX6Q7L4S7 300 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 TMEM150AQ86TG1 271 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 DEFB119Q8N690 84 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 SETD9Q8NE22 299 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 APOL4Q9BPW4 351 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 CCDC106Q9BWC9 280 aa11.56□□□□□ -0.56
HDAC6-201ENST00000334136 OLFM2O95897 454 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 TRBC1P01850 177 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 POU2F2P09086 479 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 PIK3CGP48736 1102 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 CAMK2GQ13555 558 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 PRSS36Q5K4E3 855 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 TBC1D21Q8IYX1 336 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 SVOPQ8N4V2 548 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 GATA6Q92908 595 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 RPP25Q9BUL9 199 aaKnown RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 SLC7A5P2Q9GIP4 190 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 RMND5AQ9H871 391 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 BTBD3Q9Y2F9 522 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 KCTD3Q9Y597 815 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 PCDHB1Q9Y5F3 818 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 SLC35G4P0C7Q5 338 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 FGF3P11487 239 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-201ENST00000334136 IFNA8P32881 189 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 HNF1BP35680 557 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 TNFRSF4P43489 277 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 STT3AP46977 705 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 CXCL12P48061 93 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 LIPEQ05469 1076 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 SPDYE7PQ495Y7 208 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 GPR33Q49SQ1 333 aa11.55□□□□□ -0.56
HDAC6-201ENST00000334136 Q6ZNB5 142 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms