RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 POMGNT2Q8NAT1 580 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 UBASH3BQ8TF42 649 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 CCM2Q9BSQ5 444 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 PTPN5P54829 565 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 TGFBIQ15582 683 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF730Q6ZMV8 503 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 PSMA8Q8TAA3 256 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 BTBD9Q96Q07 612 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 TRIM8Q9BZR9 551 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 CTPS2Q9NRF8 586 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 LRP5O75197 1615 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF840PA6NDX5 716 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 SCELO95171 688 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF8P17098 575 aaPredicted RBP12.74□□□□□ -0.37
VSTM4-202ENST00000332853 UTS2BQ765I0 119 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
VSTM4-202ENST00000332853 KIAA1191Q96A73 305 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 OLFM1Q99784 485 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 YIPF4Q9BSR8 244 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ZSCAN5AQ9BUG6 496 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 RBM47A0AV96 593 aaKnown RBP12.74□□□□□ -0.37
VSTM4-202ENST00000332853 UPK3BL1B0FP48 263 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 UPK3BL2E5RIL1 263 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ARPC2O15144 300 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 CD68P34810 354 aaPredicted RBP12.74□□□□□ -0.37
VSTM4-202ENST00000332853 APLP1P51693 650 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 RAPSNQ13702 412 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 BRAT1Q6PJG6 821 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ENPP7Q6UWV6 458 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 THOC6Q86W42 341 aaKnown RBP12.74□□□□□ -0.37
VSTM4-202ENST00000332853 UXS1Q8NBZ7 420 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 WFIKKN2Q8TEU8 576 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 FANCEQ9HB96 536 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 B4GALT6Q9UBX8 382 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 A0A0U1RQS6 177 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 MATN2O00339 956 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 STC2O76061 302 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 ARHGAP22Q7Z5H3 698 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 RELTQ969Z4 430 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 SRMSQ9H3Y6 488 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 MRPS30Q9NP92 439 aaKnown RBP12.74□□□□□ -0.37
VSTM4-202ENST00000332853 VPS29Q9UBQ0 182 aa12.74□□□□□ -0.37
VSTM4-202ENST00000332853 LCHNA4D1U4 455 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 PGLSO95336 258 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 GANABQ14697 944 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 DDI2Q5TDH0 399 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ANKRD26P1Q6NSI1 321 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 AHSA2Q719I0 299 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 DNASE1L2Q92874 299 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 DGCR14Q96DF8 476 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 LRRC3Q9BY71 257 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 C11orf16Q9NQ32 467 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 PTGFRNQ9P2B2 879 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 CITO14578 2027 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 MBLAC1A4D2B0 266 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 EI24O14681 340 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 KLK1P06870 262 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 SLC35E2BP0CK96 405 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 CDK9P50750 372 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ARSDP51689 593 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 GPRC6AQ5T6X5 926 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 MBOAT1Q6ZNC8 495 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 UMODL1-AS1Q8N2C9 162 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ADI1Q9BV57 179 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 WDR26Q9H7D7 661 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 EXD2Q9NVH0 621 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF624Q9P2J8 865 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 GSTK1Q9Y2Q3 226 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 TULP3O75386 442 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 HERC3Q15034 1050 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 TEFMQ96QE5 360 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 PKP2Q99959 881 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 N4BP2Q86UW6 1770 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 SOCS7O14512 581 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 LIN7AO14910 233 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 EIF2B2P49770 351 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 HNMTP50135 292 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 PDGFRLQ15198 375 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 C1orf52Q8N6N3 182 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF671Q8TAW3 534 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 CARS2Q9HA77 564 aaKnown RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 CLDND1Q9NY35 253 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 PAPSS2O95340 614 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF155Q12901 538 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 MOGSQ13724 837 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 PTCHD3Q3KNS1 767 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 TIMM50Q3ZCQ8 353 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 SUSD1Q6UWL2 747 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 GLB1L3Q8NCI6 653 aaPredicted RBP12.73□□□□□ -0.37
VSTM4-202ENST00000332853 CCDC106Q9BWC9 280 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
VSTM4-202ENST00000332853 ANGPTL1O95841 491 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 CDH3P22223 829 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 CLCNKAP51800 687 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 C1QTNF8P60827 252 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SRSF11Q05519 484 aaKnown RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SCAPQ12770 1279 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 GRSF1Q12849 480 aaKnown RBP eCLIP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 PSAPL1Q6NUJ1 521 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms