RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CLP1Q92989 425 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 ZSWIM3Q96MP5 696 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 ATG10Q9H0Y0 220 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 FAM83DQ9H4H8 585 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 ELOVL6Q9H5J4 265 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 PCDH12Q9NPG4 1184 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 SLC6A13Q9NSD5 602 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 ERVW-1Q9UQF0 538 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 SLC22A14Q9Y267 594 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 MTCL1Q9Y4B5 1905 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 PRAMEF4O60810 478 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 C8GP07360 202 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 PCNAP12004 261 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 GGT1P19440 569 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 HTRA4P83105 476 aaPredicted RBP14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 PRAMEF9Q5VWM5 478 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 CWF19L1Q69YN2 538 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 BRAT1Q6PJG6 821 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 LRRC70Q7Z2Q7 622 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 OR2T12Q8NG77 320 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 ELMO1Q92556 727 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 FBXL20Q96IG2 436 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 OR52E6Q96RD3 313 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 HEPHQ9BQS7 1158 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 TBCDQ9BTW9 1192 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 RBM38Q9H0Z9 239 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 PADI4Q9UM07 663 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 COMMD3-BMI1R4GMX3 469 aa14.5□□□□□ -0.09
CLCNKA-201ENST00000331433 KCNE1BA0A087WTH5 132 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 TMEM202A6NGA9 273 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 WASH3PC4AMC7 463 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 EIF3FO00303 357 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 KIAA0355O15063 1070 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 B3GALT4O96024 378 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 IL6P05231 212 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CTSLP07711 333 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF23P17027 643 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 PTPN2P17706 415 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 POLR2EP19388 210 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SLC6A12P48065 614 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 EPHA5P54756 1037 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 NR1H2P55055 460 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CDH15P55291 814 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 PHC1P78364 1004 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CYP4F3Q08477 520 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CBX2Q14781 532 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SMU1Q2TAY7 513 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF697Q5TEC3 545 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 TBPL2Q6SJ96 375 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 RIMKLAQ8IXN7 391 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SLC22A15Q8IZD6 547 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 RNF175Q8N4F7 328 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 FAM86B1Q8N7N1 296 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 MRPL43Q8N983 215 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 GLB1L3Q8NCI6 653 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ITFG1Q8TB96 612 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 MAGEE2Q8TD90 523 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 BPIFB1Q8TDL5 484 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 FRS2Q8WU20 508 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ING5Q8WYH8 240 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SOX17Q9H6I2 414 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CARS2Q9HA77 564 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 NUP214P35658 2090 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 PABPN1LA6NDY0 278 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SGTAO43765 313 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SEC24DO94855 1032 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ANXA6P08133 673 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CDH1P12830 882 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 TACR1P25103 407 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 VIPR1P32241 457 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF77Q15935 545 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 SLC36A3Q495N2 470 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ARHGAP15Q53QZ3 475 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CDKL4Q5MAI5 379 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 TMEM214Q6NUQ4 689 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 PHACTR4Q8IZ21 702 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ZFAND2BQ8WV99 257 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 OSCP1Q8WVF1 389 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 MRGPRX3Q96LB0 322 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 TSSK3Q96PN8 268 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 RIOK2Q9BVS4 552 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 ASIC5Q9NY37 505 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 CIDEBQ9UHD4 219 aa14.49□□□□□ -0.09
CLCNKA-201ENST00000331433 FADS2P1A8MWK0 482 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 GFYI3L273 518 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 CYP2A6P11509 494 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 RPS14P62263 151 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 PLEKHS1Q5SXH7 462 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 SPRED2Q7Z698 418 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 ANKRD46Q86W74 232 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 OFCC1Q8IZS5 231 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 TRIML2Q8N7C3 387 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF548Q8NEK5 533 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 FBXO30Q8TB52 745 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 FOXJ1Q92949 421 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 AURKBQ96GD4 344 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 IRAK3Q9Y616 596 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 GSTA4O15217 222 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 LRATO95237 230 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms