RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 FPGSQ05932 587 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 FOXM1Q08050 763 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 TIGD5Q53EQ6 642 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 LCN1P1Q5VSP4 162 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 TRNP1Q6NT89 227 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 ASB18Q6ZVZ8 466 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 LRP6O75581 1613 aa13.77□□□□□ -0.21
EPHB3-201ENST00000330394 UPK3BL1B0FP48 263 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 UPK3BL2E5RIL1 263 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 I3L521 148 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 RFPL2O75678 378 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 YES1P07947 543 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 RPS24P62847 133 aaKnown RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 FAM189BP81408 668 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 UAP1L1Q3KQV9 507 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 CYP27C1Q4G0S4 372 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PAGE3Q5JUK9 113 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 BORAQ6PGQ7 559 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 TMPRSS11BQ86T26 416 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 LGI4Q8N135 537 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 MINDY1Q8N5J2 469 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 FCGR1BQ92637 280 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 SMOQ99835 787 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 TMEM138Q9NPI0 162 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 THUMPD1Q9NXG2 353 aaKnown RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 DNMT3LQ9UJW3 386 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 OAS3Q9Y6K5 1087 aaKnown RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PRAMEF33A0A0G2JMD5 474 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 GSAPA4D1B5 854 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PRAMEF10O60809 474 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 STX11O75558 287 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PROZP22891 400 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PAX3P23760 479 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 ACLYP53396 1101 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 CDKN2DP55273 166 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 FOXA1P55317 472 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 ATAD3BQ5T9A4 648 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PLEKHG7Q6ZR37 379 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 GLB1L3Q8NCI6 653 aaPredicted RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 GTF3C2Q8WUA4 911 aaPredicted RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 ATL1Q8WXF7 558 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 TUBA1CQ9BQE3 449 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 FAM172BPA6NC97 362 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 SLC28A2O43868 658 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 KLHL18O94889 574 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 VIPP01282 170 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 IFNW1P05000 195 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 TARBP2Q15633 366 aaKnown RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 TRIM71Q2Q1W2 868 aaKnown RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 HECTD3Q5T447 861 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 BLOC1S3Q6QNY0 202 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 PYURFQ96I23 114 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 YIPF2Q9BWQ6 316 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 POLR3BQ9NW08 1133 aaPredicted RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
EPHB3-201ENST00000330394 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
EPHB3-201ENST00000330394 HMX2A2RU54 273 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 PGRMC2O15173 223 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 GADD45GO95257 159 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 OGNP20774 298 aaKnown RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 YBEYP58557 167 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ACOX1Q15067 660 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 PARP15Q460N3 678 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ANKRD26P1Q6NSI1 321 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 BHLHB9Q6PI77 547 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 TBC1D19Q8N5T2 526 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ZBTB2Q8N680 514 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 OR52B6Q8NGF0 335 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 IPCEF1Q8WWN9 437 aaPredicted RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 C3orf30Q96M34 536 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 RANBP9Q96S59 729 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SEC14L3Q9UDX4 400 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SLC30A4O14863 429 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 INSIG1O15503 277 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ERN1O75460 977 aaKnown RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 LCKP06239 509 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 MANFP55145 182 aaKnown RBP13.75□□□□□ -0.21
EPHB3-201ENST00000330394 C2orf80Q0P641 193 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 GRM2Q14416 872 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 GPAT3Q53EU6 434 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 HOMEZQ8IX15 550 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ADGRG5Q8IZF4 528 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 NDNFQ8TB73 568 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SLC38A2Q96QD8 506 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 SLC30A2Q9BRI3 323 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 DNAJC11Q9NVH1 559 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ERVK-11Q9UQG0 969 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 PCDHGB3Q9Y5G1 929 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 LOC730098B7Z3J9 87 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 DCLK1O15075 740 aa13.75□□□□□ -0.21
EPHB3-201ENST00000330394 ESR1P03372 595 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms